C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: U2 snRNP-associated SURP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000132651 u2surp-001 ENSDARG00000061490 7955 - 2:26771547-26791114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSDART00000132651
Transcript ID Brain Heart
ENSDART00000132651 4.863±0.00 3.892±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078374 U2surp-001 protein_coding Mus_musculus 0 854
ENSMUST00000079659 U2surp-002 protein_coding Mus_musculus 0 854
ENST00000461591 U2SURP-003 retained_intron Homo_sapiens 0 339
ENST00000463563 U2SURP-004 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000473835 U2SURP-001 protein_coding Homo_sapiens 0 837
ENST00000488497 U2SURP-002 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000488587 U2SURP-012 retained_intron Homo_sapiens 0 339
ENST00000493598 U2SURP-022 protein_coding Homo_sapiens 0 824

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