C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | calcium channel, voltage-dependent, L type, alpha 1C subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000613940  |
CACNA1C-201 |
ENSG00000151067 |
9606 | + |
12:2448976-2697949  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003XI | CIL_0003XI_0002 | CGP | 12:1820267-2004535 |
| CIL_0003XH | CIL_0003XH_0002 | CGP | 12:1946054-2697950 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005216 | IEA | ion channel activity |
| GO:0006811 | IEA | ion transport |
| GO:0016020 | IEA | membrane |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000187474
|
Cacna1c-008 | protein_coding | Mus_musculus | 0 | 6715 |
|
ENSMUST00000075591
|
Cacna1c-024 | protein_coding | Mus_musculus | 0 | 6593 |
|
ENSMUST00000078320
|
Cacna1c-004 | protein_coding | Mus_musculus | 0 | 6593 |
|
ENSMUST00000186889
|
Cacna1c-001 | protein_coding | Mus_musculus | 0 | 6593 |
|
ENSMUST00000187940
|
Cacna1c-002 | protein_coding | Mus_musculus | 0 | 6538 |
|
ENSMUST00000188078
|
Cacna1c-015 | protein_coding | Mus_musculus | 0 | 6421 |
|
ENSMUST00000112790
|
Cacna1c-005 | protein_coding | Mus_musculus | 0 | 6416 |
|
ENSMUST00000188865
|
Cacna1c-020 | protein_coding | Mus_musculus | 0 | 6244 |
|
ENSMUST00000190285
|
Cacna1c-007 | protein_coding | Mus_musculus | 0 | 5522 |
|
ENSMUST00000187386
|
Cacna1c-006 | protein_coding | Mus_musculus | 0 | 5345 |
|
ENSMUST00000188522
|
Cacna1c-014 | protein_coding | Mus_musculus | 0 | 5345 |
|
ENSMUST00000189389
|
Cacna1c-016 | protein_coding | Mus_musculus | 0 | 4567 |
|
ENSMUST00000189520
|
Cacna1c-017 | protein_coding | Mus_musculus | 0 | 4446 |
|
ENSMUST00000188106
|
Cacna1c-011 | protein_coding | Mus_musculus | 0 | 3544 |
|
ENSMUST00000185345
|
Cacna1c-019 | protein_coding | Mus_musculus | 0 | 3371 |
|
ENSMUST00000112793
|
Cacna1c-010 | protein_coding | Mus_musculus | 0 | 3306 |
|
ENSMUST00000187317
|
Cacna1c-018 | protein_coding | Mus_musculus | 0 | 3007 |
|
ENSDART00000132909
|
cacna1c-001 | protein_coding | Danio_rerio | 0 | 2135 |
|
ENSDART00000028856
|
cacna1c-201 | protein_coding | Danio_rerio | 0 | 2015 |
|
ENSMUST00000112825
|
Cacna1c-201 | protein_coding | Mus_musculus | 0 | 1923 |
|
ENSMUST00000188181
|
Cacna1c-012 | processed_transcript | Mus_musculus | 0 | 1923 |
|
ENSDART00000100118
|
cacna1da-202 | protein_coding | Danio_rerio | 0 | 1262 |
|
ENSMUST00000112250
|
Cacna1d-202 | protein_coding | Mus_musculus | 0 | 944 |
|
ENSMUST00000112249
|
Cacna1d-201 | protein_coding | Mus_musculus | 0 | 944 |
|
ENSMUST00000112064
|
Cacna1s-201 | protein_coding | Mus_musculus | 0 | 776 |
|
ENSMUST00000161865
|
Cacna1s-003 | protein_coding | Mus_musculus | 0 | 776 |
|
ENSMUST00000112068
|
Cacna1s-001 | protein_coding | Mus_musculus | 0 | 776 |
|
ENSMUST00000160641
|
Cacna1s-002 | protein_coding | Mus_musculus | 0 | 776 |
|
ENSDART00000089956
|
cacna1da-201 | protein_coding | Danio_rerio | 0 | 652 |
|
ENSDART00000058276
|
cacna1da-001 | protein_coding | Danio_rerio | 0 | 652 |
|
ENSMUST00000191196
|
Cacna1c-021 | processed_transcript | Mus_musculus | 0 | 545 |
|
ENSMUST00000187849
|
Cacna1c-023 | processed_transcript | Mus_musculus | 0 | 472 |
|
ENSDART00000065375
|
cacna1db-201 | protein_coding | Danio_rerio | 0 | 387 |
|
ENSDART00000062406
|
cacna1sb-001 | protein_coding | Danio_rerio | 0 | 361 |
|
ENSDART00000041564
|
cacna1f-201 | protein_coding | Danio_rerio | 0 | 350 |
|
ENSDART00000134151
|
cacna1f-001 | protein_coding | Danio_rerio | 0 | 350 |
|
ENSMUST00000155090
|
Cacna1f-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1147 |
|
ENSMUST00000115726
|
Cacna1f-001 | protein_coding | Mus_musculus | 0 | 1147 |
|
ENSMUST00000115725
|
Cacna1f-002 | protein_coding | Mus_musculus | 0 | 669 |
|
ENSMUST00000141634
|
Cacna1f-004 | retained_intron | Mus_musculus | 0 | 1147 |
|
ENSDART00000105895
|
cacna1sa-001 | protein_coding | Danio_rerio | 0 | 396 |
