C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000134524 rps11-002 ENSDARG00000053058 7955 + 3:37782091-37783991 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062226 Rps11-ps4-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000117608 Rps11-ps3-001 processed_pseudogene Mus_musculus 0 243
ENST00000270625 RPS11-001 protein_coding Homo_sapiens 0 388
ENST00000442125 RPS11P7-001 processed_pseudogene Homo_sapiens 0 220
ENST00000594493 RPS11-003 protein_coding Homo_sapiens 0 388
ENST00000596873 RPS11-006 protein_coding Homo_sapiens 0 281
ENST00000599167 RPS11-004 retained_intron Homo_sapiens 0 263
ENST00000599561 RPS11-008 protein_coding Homo_sapiens 0 274
ENST00000600027 RPS11-005 retained_intron Homo_sapiens 0 263
ENST00000601216 RPS11-007 retained_intron Homo_sapiens 0 239
ENST00000601306 RPS11-009 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000602252 RPS11-002 retained_intron Homo_sapiens 0 346

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