C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spectrin, beta, non-erythrocytic 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000134537 SPTBN4 (2 of 2)-001 ENSDARG00000092624 7955 - 18:44507676-44544380 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000134537
Transcript ID Brain Heart Kidney Muscle
ENSDART00000134537 3.968±0.00 0.037±0.00 0.145±0.00 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UW CIL_0006UW_0001 CGP 18:44507676-44568561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008991 Sptbn2-201 protein_coding Mus_musculus 0 353
ENSMUST00000011895 Sptbn4-001 protein_coding Mus_musculus 0 676
ENSMUST00000138087 Sptbn4-007 processed_transcript Mus_musculus 0.0000000009 68
ENSMUST00000152572 Sptbn4-002 protein_coding Mus_musculus 2e-17 94
ENSMUST00000172269 Sptbn4-201 protein_coding Mus_musculus 0 676
ENST00000338932 SPTBN4-201 protein_coding Homo_sapiens 0 641
ENST00000352632 SPTBN4-001 protein_coding Homo_sapiens 0 641
ENST00000392025 SPTBN4-202 protein_coding Homo_sapiens 0 641
ENST00000595535 SPTBN4-003 protein_coding Homo_sapiens 0 641
ENST00000598249 SPTBN4-011 protein_coding Homo_sapiens 0 641

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