C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spectrin, beta, non-erythrocytic 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338932 SPTBN4-201 ENSG00000160460 9606 + 19:40467219-40576458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000338932
Transcript ID Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000338932 4.342±0.00 0.471±0.00 0.438±0.00 0.101±0.00 0.023±0.00 0.614±0.00 1.825±0.00 0.046±0.00 0.695±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IEA protein binding
GO:0008091 IEA spectrin

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000011895 Sptbn4-001 protein_coding Mus_musculus 0 10050
ENSMUST00000172269 Sptbn4-201 protein_coding Mus_musculus 0 9939
ENSMUST00000108362 Sptbn4-006 protein_coding Mus_musculus 0 5457
ENSMUST00000108363 Sptbn4-004 protein_coding Mus_musculus 0 5456
ENSMUST00000108364 Sptbn4-005 protein_coding Mus_musculus 0 5454
ENSDART00000134537 SPTBN4 (2 of 2)-001 protein_coding Danio_rerio 0 641
ENSMUST00000008991 Sptbn2-201 protein_coding Mus_musculus 0 588
ENSMUST00000166101 Sptb-002 protein_coding Mus_musculus 0 514
ENSMUST00000021458 Sptb-001 protein_coding Mus_musculus 0 514
ENSMUST00000152572 Sptbn4-002 protein_coding Mus_musculus 0 329
ENSMUST00000138087 Sptbn4-007 processed_transcript Mus_musculus 0 193

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