C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spectrin, beta, non-erythrocytic 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000595535 SPTBN4-003 ENSG00000160460 9606 + 19:40466241-40560507 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartMuscleOvaryPlacentaENST00000595535
Transcript ID Adipose Adrenal Bladder Breast Heart Muscle Ovary Placenta
ENST00000595535 0.145±0.00 0.263±0.00 0.068±0.00 0.645±0.00 0.563±0.00 0.159±0.00 0.038±0.02 0.068±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IEA protein binding
GO:0008091 IEA spectrin

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000011895 Sptbn4-001 protein_coding Mus_musculus 0 7103
ENSMUST00000172269 Sptbn4-201 protein_coding Mus_musculus 0 7016
ENSMUST00000108362 Sptbn4-006 protein_coding Mus_musculus 0 2549
ENSMUST00000108363 Sptbn4-004 protein_coding Mus_musculus 0 2547
ENSMUST00000108364 Sptbn4-005 protein_coding Mus_musculus 0 2545
ENSDART00000134537 SPTBN4 (2 of 2)-001 protein_coding Danio_rerio 0 641
ENSMUST00000008991 Sptbn2-201 protein_coding Mus_musculus 0 588
ENSMUST00000166101 Sptb-002 protein_coding Mus_musculus 0 514
ENSMUST00000021458 Sptb-001 protein_coding Mus_musculus 0 514
ENSMUST00000152572 Sptbn4-002 protein_coding Mus_musculus 0 329
ENSMUST00000138087 Sptbn4-007 processed_transcript Mus_musculus 0 193

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