C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000137066 rps3a-002 ENSDARG00000035692 7955 + 1:23130380-23132818 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSDART00000137066
Transcript ID Brain Kidney
ENSDART00000137066 0.101±0.00 0.101±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LR CIL_0006LR_0001 CGP 1:22850438-23134510

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029722 Rps3a1-001 protein_coding Mus_musculus 0 196
ENSMUST00000074245 Rps3a2-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000074680 Rps3a3-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000119822 Gm13408-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000121859 Gm13935-001 processed_pseudogene Mus_musculus 1e-26 124

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