C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074245 Rps3a2-001 ENSMUSG00000062611 10090 - 14:88123017-88123808 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074245 4.784±1.40 0.225±0.00 17.620±15.85 8.210±7.60 3.457±1.97 0.595±0.36 1.372±0.41 1.160±0.55 16.848±28.50 1.233±0.32 0.998±0.50 3.205±2.45 0.265±0.20 0.544±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KQ CIL_0005KQ_0003 CGP 14:87416639-88471396

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051763 rps3a-001 protein_coding Danio_rerio 0 571
ENSDART00000137066 rps3a-002 retained_intron Danio_rerio 0 191
ENST00000274065 RPS3A-001 protein_coding Homo_sapiens 0 979
ENST00000389400 RPS3AP5-001 processed_pseudogene Homo_sapiens 0 385
ENST00000419176 RP11-119F7.3-001 processed_pseudogene Homo_sapiens 0 627
ENST00000461022 AC010468.1-001 processed_pseudogene Homo_sapiens 0 811
ENST00000472161 RPS3AP49-001 processed_pseudogene Homo_sapiens 0 857
ENST00000474167 CTC-451P13.1-001 processed_pseudogene Homo_sapiens 0 850
ENST00000479876 RPS3AP32-001 processed_pseudogene Homo_sapiens 0 390
ENST00000484430 RPS3AP6-001 processed_pseudogene Homo_sapiens 0 963
ENST00000493479 RP11-555K12.1-001 processed_pseudogene Homo_sapiens 0 721
ENST00000506126 RPS3A-007 protein_coding Homo_sapiens 0 893
ENST00000507327 RPS3A-011 protein_coding Homo_sapiens 0 843
ENST00000507485 RPS3A-002 retained_intron Homo_sapiens 0 250
ENST00000509736 RPS3A-006 protein_coding Homo_sapiens 0 536
ENST00000510993 RPS3A-010 protein_coding Homo_sapiens 0 817
ENST00000512690 RPS3A-015 protein_coding Homo_sapiens 0 933
ENST00000512797 RPS3A-014 protein_coding Homo_sapiens 0 628
ENST00000514682 RPS3A-004 protein_coding Homo_sapiens 0 893
ENST00000515792 RPS3A-012 protein_coding Homo_sapiens 0 536
ENST00000515818 RPS3A-013 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000604922 SH3D19-012 processed_transcript Homo_sapiens 0 255

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