C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006LR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015266-ENSDARG00000035692 CGP 7955 1:22850438-23134510
GeneTranscriptPositionBiotype
ENSDARG00000015266 (mab21l2)
mab-21-like 2 		ENSDART00000014608 (mab21l2-001) 22850438-22852294 protein_coding
ENSDARG00000031108 (lrba)
LPS-responsive vesicle trafficking, beach and anchor containing 		ENSDART00000025224 (lrba-201) 22694787-23124646 protein_coding
ENSDART00000142740 (lrba-002) 23038402-23124616 protein_coding
ENSDART00000146960 (lrba-001) 22749492-23029334 protein_coding
ENSDARG00000035692 (rps3a)
ribosomal protein S3A 		ENSDART00000051763 (rps3a-001) 23130372-23134510 protein_coding
ENSDART00000137066 (rps3a-002) 23130380-23132818 retained_intron
ENSDART00000143428 (rps3a-003) 23130399-23131729 retained_intron
CIL_0006LR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181541-ENSG00000145425 CGP 9606 4:150581922-151104652
GeneTranscriptPositionBiotype
ENSG00000145425 (RPS3A)
ribosomal protein S3A 		ENST00000274065 (RPS3A-001) 151099573-151104652 protein_coding
ENST00000503002 (RPS3A-008) 151099631-151101114 protein_coding
ENST00000505243 (RPS3A-005) 151099628-151102932 protein_coding
ENST00000506126 (RPS3A-007) 151099674-151104623 protein_coding
ENST00000507327 (RPS3A-011) 151099669-151104490 protein_coding
ENST00000507485 (RPS3A-002) 151099628-151104205 retained_intron
ENST00000508783 (RPS3A-009) 151099640-151103004 protein_coding
ENST00000509736 (RPS3A-006) 151099624-151104637 protein_coding
ENST00000510993 (RPS3A-010) 151099873-151104528 protein_coding
ENST00000512690 (RPS3A-015) 151099639-151104637 protein_coding
ENST00000512797 (RPS3A-014) 151099668-151104537 protein_coding
ENST00000514682 (RPS3A-004) 151099629-151104637 protein_coding
ENST00000515792 (RPS3A-012) 151099671-151104637 protein_coding
ENST00000515818 (RPS3A-013) 151099629-151104238 nonsense_mediated_decay
ENSG00000181541 (MAB21L2)
mab-21-like 2 (C. elegans) 		ENST00000317605 (MAB21L2-001) 150581922-150584693 protein_coding
ENSG00000183432 (ZBTB8OSP1)
zinc finger and BTB domain containing 8 opposite strand pseudogene 1 		ENST00000342688 (ZBTB8OSP1-001) 150720981-150721478 processed_pseudogene
ENSG00000198589 (LRBA)
LPS-responsive vesicle trafficking, beach and anchor containing 		ENST00000357115 (LRBA-002) 150264659-151015497 protein_coding
ENST00000502839 (LRBA-011) 150840540-150848887 protein_coding
ENST00000503716 (LRBA-004) 150264659-150581722 processed_transcript
ENST00000507224 (LRBA-008) 150314723-151015277 protein_coding
ENST00000508396 (LRBA-012) 150683603-150683963 processed_transcript
ENST00000508606 (LRBA-014) 150265566-150302711 protein_coding
ENST00000509835 (LRBA-003) 150264661-150849537 protein_coding
ENST00000510157 (LRBA-010) 150265026-150315634 retained_intron
ENST00000510413 (LRBA-001) 150264531-151015267 protein_coding
ENST00000510841 (LRBA-006) 151012829-151015727 retained_intron
ENST00000513021 (LRBA-013) 150490957-150679667 processed_transcript
ENST00000514435 (LRBA-007) 151012805-151015284 retained_intron
ENST00000515096 (LRBA-009) 150264659-150311369 retained_intron
ENSG00000201264 (SNORD73)
Small nucleolar RNA SNORD73 		ENST00000364394 (SNORD73.1-201) 151102057-151102128 snoRNA
ENSG00000221235 (AC110813.1)
 ENST00000408308 (AC110813.1-201) 150639756-150639866 miRNA
ENSG00000235606 (AK4P6)
adenylate kinase 4 pseudogene 6 		ENST00000505168 (AK4P6-001) 151027090-151027617 processed_pseudogene
ENSG00000252451 (RNA5SP168)
RNA, 5S ribosomal pseudogene 168 		ENST00000516642 (RNA5SP168-201) 150970671-150970782 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LR_0001ENSDARG00000015266ENSDART00000014608ENSDARG00000031108ENSDART00000025224ENSDART00000142740ENSDART00000146960ENSDARG00000035692ENSDART00000051763ENSDART00000137066ENSDART00000143428CIL_0006LR_0002ENSG00000145425ENST00000274065ENST00000503002ENST00000505243ENST00000506126ENST00000507327ENST00000507485ENST00000508783ENST00000509736ENST00000510993ENST00000512690ENST00000512797ENST00000514682ENST00000515792ENST00000515818ENSG00000181541ENST00000317605ENSG00000183432ENST00000342688ENSG00000198589ENST00000357115ENST00000502839ENST00000503716ENST00000507224ENST00000508396ENST00000508606ENST00000509835ENST00000510157ENST00000510413ENST00000510841ENST00000513021ENST00000514435ENST00000515096ENSG00000201264ENST00000364394ENSG00000221235ENST00000408308ENSG00000235606ENST00000505168ENSG00000252451ENST00000516642
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LR_0001ENSDARG00000015266ENSDART00000014608ENSDARG00000031108ENSDART00000025224ENSDARG00000035692ENSDART00000051763ENSDART00000137066ENSDART00000143428CIL_0006LR_0002ENSG00000145425ENST00000274065ENST00000509736ENST00000510993ENST00000512690ENSG00000181541ENST00000317605ENSG00000183432ENST00000342688ENSG00000198589ENST00000357115ENST00000503716ENST00000507224ENST00000509835ENST00000510157ENST00000510413ENSG00000201264ENST00000364394ENSG00000221235ENST00000408308ENSG00000235606ENST00000505168ENSG00000252451ENST00000516642
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015266 ENSDART00000014608 N/A N/A N/A 11.406±1.49 N/A N/A N/A 0.073±0.00 0.044±0.00 N/A 1.007±0.00 N/A N/A N/A
ENSDARG00000031108 ENSDART00000025224 N/A N/A N/A 2.085±1.04 N/A N/A 1.717±0.42 6.558±5.25 0.291±0.00 N/A N/A N/A N/A N/A
ENSDART00000142740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000035692 ENSDART00000051763 N/A N/A N/A 285.911±44.62 N/A N/A 1398.202±985.99 419.447±581.03 800.730±0.00 N/A 923.702±0.00 N/A N/A N/A
ENSDART00000137066 N/A N/A N/A 0.101±0.00 N/A N/A N/A 0.101±0.01 N/A N/A N/A N/A N/A N/A
ENSDART00000143428 N/A N/A N/A 0.123±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145425 ENST00000274065 147.138±0.00 307.123±0.00 53.479±0.00 115.893±57.94 260.354±102.97 336.415±17.21 89.638±6.68 189.662±12.39 189.319±102.57 275.238±23.13 119.076±50.17 548.431±598.32 543.895±346.63 178.578±0.00
ENST00000503002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509736 110.197±0.00 239.433±0.00 N/A 53.884±0.00 147.382±0.00 243.680±0.00 N/A N/A N/A 242.707±0.00 N/A 227.344±21.72 160.098±0.00 136.226±52.92
ENST00000510993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.662±0.00
ENST00000512690 N/A N/A 30.990±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181541 ENST00000317605 0.013±0.00 0.150±0.00 0.530±0.00 0.130±0.06 2.514±2.47 81.815±75.64 0.023±0.00 0.158±0.05 0.460±0.12 0.448±0.28 0.148±0.14 0.128±0.18 0.067±0.06 0.056±0.00
ENSG00000183432 ENST00000342688 N/A 0.045±0.00 0.990±0.00 N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00
ENSG00000198589 ENST00000357115 0.491±0.00 N/A 1.421±0.00 0.620±0.00 0.503±0.00 4.293±0.00 0.673±0.00 N/A 0.946±0.28 1.237±0.00 N/A 0.439±0.00 N/A 0.869±0.00
ENST00000502839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503716 N/A N/A N/A N/A N/A 2.584±0.00 N/A 2.550±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507224 N/A N/A 8.927±0.00 2.659±0.00 5.504±0.00 9.483±0.00 1.316±0.00 2.326±0.00 7.318±0.00 5.458±0.00 1.169±0.00 4.109±0.00 N/A N/A
ENST00000508396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509835 1.871±0.00 2.854±0.00 N/A 1.349±0.39 2.616±0.32 1.938±0.00 1.429±0.58 5.647±0.00 1.170±0.00 2.096±0.00 0.943±0.00 4.058±1.77 1.231±0.91 4.948±0.29
ENST00000510157 1.888±0.00 5.331±0.00 N/A N/A 2.427±0.00 5.545±0.00 N/A 7.519±0.00 N/A N/A N/A N/A N/A 5.170±0.00
ENST00000510413 N/A 0.932±0.00 N/A N/A N/A 0.643±0.00 2.021±0.00 2.271±0.00 N/A N/A 0.747±0.00 1.814±0.00 0.434±0.00 1.479±0.00
ENST00000510841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201264 ENST00000364394 N/A N/A N/A N/A N/A 2.709±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221235 ENST00000408308 0.939±0.00 1.635±0.00 N/A 0.944±0.00 0.504±0.00 0.088±0.00 0.467±0.00 2.040±0.00 0.886±0.00 0.217±0.00 0.100±0.00 N/A N/A 1.321±0.00
ENSG00000235606 ENST00000505168 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000252451 ENST00000516642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.863±0.00 N/A N/A

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