C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138289 prex1-001 ENSDARG00000075793 7955 - 8:26277004-26419290 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSDART00000138289
Transcript ID Brain Kidney
ENSDART00000138289 0.831±0.00 4.681±2.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036719 Prex1-001 protein_coding Mus_musculus 9e-26 124
ENSMUST00000099080 Prex1-003 protein_coding Mus_musculus 8e-26 124
ENST00000371941 PREX1-001 protein_coding Homo_sapiens 3e-40 172
ENST00000482556 PREX1-002 nonsense_mediated_decay Homo_sapiens 2e-40 172

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