C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482556 PREX1-002 ENSG00000124126 9606 - 20:48624252-48657127 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENST00000482556
Transcript ID Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000482556 7.506±0.00 10.120±0.00 1.131±0.00 0.633±0.00 0.563±0.00 3.858±0.00 1.629±0.21 1.992±0.54 1.870±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025A CIL_00025A_0001 CGP 20:47656348-48827883

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099080 Prex1-003 protein_coding Mus_musculus 0 2423
ENSMUST00000036719 Prex1-001 protein_coding Mus_musculus 0 2423
ENSMUST00000109246 Prex1-004 protein_coding Mus_musculus 0 1051
ENSDART00000078022 prex1-201 protein_coding Danio_rerio 2e-40 172
ENSDART00000138289 prex1-001 protein_coding Danio_rerio 2e-40 172

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