C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromobox homolog 5 (HP1 alpha homolog, Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000143340 cbx5-001 ENSDARG00000061187 7955 - 23:36348765-36357900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000143340
Transcript ID Brain Heart Kidney Liver
ENSDART00000143340 12.829±0.52 3.678±0.50 4.935±0.00 0.176±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TM CIL_0002TM_0001 CGP 23:36348765-36361962

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031862 Cbx3-002 protein_coding Mus_musculus 7e-27 126
ENSMUST00000081455 Gm10068-001 processed_pseudogene Mus_musculus 2e-27 126
ENSMUST00000094623 Cbx3-001 protein_coding Mus_musculus 4e-27 126
ENSMUST00000114445 Cbx3-004 protein_coding Mus_musculus 6e-27 126
ENSMUST00000114446 Cbx3-005 protein_coding Mus_musculus 6e-27 126
ENSMUST00000181108 Gm6984-001 processed_pseudogene Mus_musculus 3e-26 122
ENSMUST00000188772 Als2cr12-002 protein_coding Mus_musculus 5e-27 126

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