| Transcript ID | Kidney | Liver | Lung |
|---|---|---|---|
| ENST00000585802 | 0.036±0.00 | 0.030±0.00 | 0.030±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | calcium channel, voltage-dependent, P/Q type, alpha 1A subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000585802  |
CACNA1A-012 |
ENSG00000141837 |
9606 | - |
19:13207301-13275896  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007VV | CIL_0007VV_0001 | VISTA | 19:12752697-13356541 |
| CIL_0007ZV | CIL_0007ZV_0001 | VISTA | 19:12767682-13372012 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005216 | IEA | ion channel activity |
| GO:0005245 | IEA | voltage-gated calcium channel activity |
| GO:0005891 | IEA | voltage-gated calcium channel complex |
| GO:0006811 | IEA | ion transport |
| GO:0016020 | IEA | membrane |
| GO:0034765 | IEA | regulation of ion transmembrane transport |
| GO:0055085 | IEA | transmembrane transport |
| GO:0070588 | IEA | calcium ion transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000122053
|
Cacna1a-002 | protein_coding | Mus_musculus | 0 | 2911 |
|
ENSMUST00000121390
|
Cacna1a-001 | protein_coding | Mus_musculus | 0 | 2911 |
|
ENSDART00000150130
|
cacna1ab-001 | protein_coding | Danio_rerio | 0 | 1225 |
|
ENSDART00000008139
|
cacna1ab-201 | protein_coding | Danio_rerio | 0 | 1166 |
|
ENSMUST00000004214
|
Cacna1e-201 | protein_coding | Mus_musculus | 0 | 891 |
|
ENSMUST00000187541
|
Cacna1e-001 | protein_coding | Mus_musculus | 0 | 891 |
|
ENSMUST00000144879
|
Cacna1a-005 | retained_intron | Mus_musculus | 0 | 832 |
|
ENSMUST00000153691
|
Cacna1a-010 | processed_transcript | Mus_musculus | 0 | 704 |
|
ENSMUST00000141981
|
Cacna1a-008 | retained_intron | Mus_musculus | 0 | 669 |
|
ENSDART00000134656
|
CACNA1E (2 of 2)-001 | protein_coding | Danio_rerio | 0 | 584 |
|
ENSMUST00000143215
|
Cacna1a-007 | retained_intron | Mus_musculus | 0 | 505 |
|
ENSDART00000149273
|
cacna1ab-003 | processed_transcript | Danio_rerio | 0 | 416 |
|
ENSMUST00000126302
|
Cacna1a-006 | retained_intron | Mus_musculus | 0 | 414 |
|
ENSDART00000148949
|
cacna1ab-004 | protein_coding | Danio_rerio | 0 | 207 |
|
ENSMUST00000130507
|
Cacna1a-009 | processed_transcript | Mus_musculus | 2e-34 | 148 |
