C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family G (WHITE), member 4b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000152213 abcg4b-003 ENSDARG00000078068 7955 - 15:22842184-22849158 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSDART00000152213
Transcript ID Heart
ENSDART00000152213 0.528±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q2 CIL_0006Q2_0001 CGP 15:22821573-22861762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034648 Abcg4-003 protein_coding Mus_musculus 0 276
ENSMUST00000085979 Abcg4-004 retained_intron Mus_musculus 0 196
ENSMUST00000159385 Abcg4-005 retained_intron Mus_musculus 0 276
ENSMUST00000159997 Abcg4-009 retained_intron Mus_musculus 2.00386e-43 180
ENSMUST00000160323 Abcg4-002 processed_transcript Mus_musculus 0 193
ENSMUST00000161354 Abcg4-001 protein_coding Mus_musculus 0 276
ENSMUST00000162783 Abcg4-010 nonsense_mediated_decay Mus_musculus 0 252
ENST00000343687 ABCG1-005 protein_coding Homo_sapiens 0 209
ENST00000347800 ABCG1-004 protein_coding Homo_sapiens 0 209
ENST00000361802 ABCG1-006 protein_coding Homo_sapiens 0 209
ENST00000398437 ABCG1-008 protein_coding Homo_sapiens 0 209
ENST00000398449 ABCG1-001 protein_coding Homo_sapiens 0 209
ENST00000398457 ABCG1-002 protein_coding Homo_sapiens 0 209
ENST00000462050 ABCG1-003 processed_transcript Homo_sapiens 0 209
ENST00000472587 ABCG1-007 retained_intron Homo_sapiens 0 209
ENST00000496783 ABCG1-009 retained_intron Homo_sapiens 0 198

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