C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) receptor, rho 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000152675 gabrr1-002 ENSDARG00000043902 7955 - 20:1155888-1165031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSDART00000152675
Transcript ID Kidney
ENSDART00000152675 0.169±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024035 Gabrr2-201 protein_coding Mus_musculus 0 311
ENSMUST00000029947 Gabrr1-001 protein_coding Mus_musculus 0 353
ENSMUST00000108162 Gabrr2-001 protein_coding Mus_musculus 0 311
ENSMUST00000131920 Gabrr2-003 protein_coding Mus_musculus 0 311
ENST00000369451 GABRR1-003 protein_coding Homo_sapiens 0 309
ENST00000402938 GABRR2-001 protein_coding Homo_sapiens 0 255
ENST00000435811 GABRR1-201 protein_coding Homo_sapiens 0 309
ENST00000454853 GABRR1-001 protein_coding Homo_sapiens 0 309
ENST00000457434 GABRR1-002 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000602432 GABRR2-002 retained_intron Homo_sapiens 0 255
ENST00000611484 GABRR1-202 protein_coding Homo_sapiens 0 309
ENST00000621627 GABRR1-203 protein_coding Homo_sapiens 0 309

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