C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zgc:112234
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000152766 zgc:112234-001 ENSDARG00000070297 7955 - 25:37406556-37406927 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0004 UCNEbase 25:37216824-37485434

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0 342
ENSMUST00000117558 Hist3h2bb-ps-001 processed_pseudogene Mus_musculus 0 339
ENST00000396980 HIST1H2BN-201 protein_coding Homo_sapiens 0 342
ENST00000436555 HIST3H2BA-001 unitary_pseudogene Homo_sapiens 0 339
ENST00000449538 HIST1H2BN-002 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000541790 HIST1H2BG-001 protein_coding Homo_sapiens 0 300
ENST00000606613 HIST1H2BN-003 protein_coding Homo_sapiens 0 344
ENST00000612898 HIST1H2BN-001 protein_coding Homo_sapiens 0 344
ENST00000620438 HIST3H2BB-001 protein_coding Homo_sapiens 0 344

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