C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000153937 PRKD1-001 ENSDARG00000075949 7955 + 17:28942087-29028304 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000153937
Transcript ID Brain Kidney Muscle
ENSDART00000153937 3.934±2.11 0.115±0.00 0.244±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003191 Prkd3-001 protein_coding Mus_musculus 1e-19 104
ENSMUST00000086104 Prkd2-201 protein_coding Mus_musculus 0 647
ENSMUST00000118768 Prkd3-004 protein_coding Mus_musculus 5e-20 104
ENSMUST00000118991 Prkd3-005 protein_coding Mus_musculus 2e-20 104
ENSMUST00000119284 Prkd3-002 protein_coding Mus_musculus 8e-20 104
ENSMUST00000124229 Prkd3-006 retained_intron Mus_musculus 6e-20 104
ENSMUST00000146917 Prkd3-003 processed_transcript Mus_musculus 2e-20 104
ENSMUST00000168093 Prkd2-202 protein_coding Mus_musculus 0 647
ENSMUST00000168887 Prkd3-201 protein_coding Mus_musculus 1e-19 104
ENST00000234179 PRKD3-201 protein_coding Homo_sapiens 1e-23 117
ENST00000379066 PRKD3-001 protein_coding Homo_sapiens 1e-23 117
ENST00000475912 PRKD3-006 retained_intron Homo_sapiens 2e-24 117
ENST00000494667 PRKD3-002 retained_intron Homo_sapiens 1e-23 117

Loading