C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone deacetylase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000157378 hdac5-001 ENSDARG00000075139 7955 + 3:23226424-23267697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSDART00000157378
Transcript ID Brain Liver
ENSDART00000157378 4.107±0.00 0.651±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IEA histone deacetylase complex
GO:0004407 IEA histone deacetylase activity
GO:0016568 IEA chromatin modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008999 Hdac5-002 protein_coding Mus_musculus 0 327
ENSMUST00000107150 Hdac5-019 protein_coding Mus_musculus 0 327
ENSMUST00000107151 Hdac5-003 protein_coding Mus_musculus 0 327
ENSMUST00000107152 Hdac5-001 protein_coding Mus_musculus 0 327
ENSMUST00000124077 Hdac5-007 nonsense_mediated_decay Mus_musculus 0 327
ENSMUST00000131254 Hdac5-009 protein_coding Mus_musculus 7.00649e-43 178
ENSMUST00000149087 Hdac5-020 retained_intron Mus_musculus 1e-18 100
ENSMUST00000156337 Hdac5-005 protein_coding Mus_musculus 0 241
ENST00000345617 HDAC4-001 protein_coding Homo_sapiens 0 424
ENST00000487617 HDAC4-014 retained_intron Homo_sapiens 0 243
ENST00000543185 HDAC4-201 protein_coding Homo_sapiens 0 424

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