C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 72 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491094 VPS72-003 ENSG00000163159 9606 - 1:151169987-151190188 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000491094
Transcript ID Liver
ENST00000491094 0.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UG CIL_0000UG_0002 CGP 1:151156664-151170297

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107227 Tmod4-005 protein_coding Mus_musculus 0 1264
ENSMUST00000005769 Tmod4-001 protein_coding Mus_musculus 0 1264
ENSMUST00000009102 Vps72-001 protein_coding Mus_musculus 0 1249
ENSMUST00000125548 Vps72-004 processed_transcript Mus_musculus 0 976
ENSMUST00000130545 Tmod4-002 retained_intron Mus_musculus 0 946
ENSMUST00000173594 Gm18737-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000131597 Tmod4-006 protein_coding Mus_musculus 0 593
ENSMUST00000152333 Vps72-005 retained_intron Mus_musculus 0 501
ENSMUST00000139296 Vps72-002 processed_transcript Mus_musculus 0 383
ENSMUST00000135867 Tmod4-003 protein_coding Mus_musculus 0 366
ENSMUST00000136076 Vps72-003 processed_transcript Mus_musculus 0 219
ENSDART00000024294 tmod4-201 protein_coding Danio_rerio 5.99994e-41 174
ENSDART00000137153 tmod4-001 protein_coding Danio_rerio 5.99994e-41 174

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