C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein H1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000059918 hnrnph1-201 ENSDARG00000040881 7955 + 14:6957524-6980892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000059918
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000059918 6.650±3.88 4.907±2.77 1.908±0.44 0.284±0.00 4.953±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F3 CIL_0004F3_0001 CGP 14:6957524-7011289

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0019012 IEA virion
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020263 Hnrnph3-001 protein_coding Mus_musculus 0 255
ENSMUST00000050331 Hnrnph2-004 protein_coding Mus_musculus 0 379
ENSMUST00000059297 Hnrnph2-002 protein_coding Mus_musculus 0 379
ENSMUST00000069304 Hnrnph1-201 protein_coding Mus_musculus 0 501
ENSMUST00000074950 Hnrnph2-001 protein_coding Mus_musculus 0 379
ENSMUST00000077817 Hnrnph1-006 protein_coding Mus_musculus 0 501
ENSMUST00000109142 Hnrnph1-005 protein_coding Mus_musculus 0 501
ENSMUST00000113202 Hnrnph2-005 protein_coding Mus_musculus 0 379
ENSMUST00000113203 Hnrnph2-003 protein_coding Mus_musculus 0 379
ENSMUST00000118898 Hnrnph3-002 protein_coding Mus_musculus 0 255
ENSMUST00000123371 Hnrnph1-008 processed_transcript Mus_musculus 0 255
ENSMUST00000126737 Hnrnph1-007 processed_transcript Mus_musculus 0 255
ENSMUST00000127964 Hnrnph1-010 processed_transcript Mus_musculus 0 324
ENSMUST00000133435 Hnrnph1-013 processed_transcript Mus_musculus 0 407
ENSMUST00000134230 Hnrnph1-009 processed_transcript Mus_musculus 0 420
ENSMUST00000170943 Gm8775-201 protein_coding Mus_musculus 0 309
ENST00000265866 HNRNPH3-012 protein_coding Homo_sapiens 0 246
ENST00000316594 HNRNPH2-001 protein_coding Homo_sapiens 0 418
ENST00000329433 HNRNPH1-009 protein_coding Homo_sapiens 0 508
ENST00000354695 HNRNPH3-003 protein_coding Homo_sapiens 0 246
ENST00000356731 HNRNPH1-001 protein_coding Homo_sapiens 0 508
ENST00000393432 HNRNPH1-006 protein_coding Homo_sapiens 0 508
ENST00000442819 HNRNPH1-005 protein_coding Homo_sapiens 0 508
ENST00000467249 HNRNPH3-001 processed_transcript Homo_sapiens 0 246
ENST00000469172 HNRNPH3-004 processed_transcript Homo_sapiens 0 193
ENST00000481819 HNRNPH3-006 processed_transcript Homo_sapiens 0 193
ENST00000486854 HNRNPH3-009 processed_transcript Homo_sapiens 0 246
ENST00000491200 HNRNPH3-005 processed_transcript Homo_sapiens 0 215
ENST00000504348 HNRNPH1-021 protein_coding Homo_sapiens 0 351
ENST00000505811 HNRNPH1-015 protein_coding Homo_sapiens 0 457
ENST00000510411 HNRNPH1-008 protein_coding Homo_sapiens 0 508
ENST00000513225 HNRNPH1-013 protein_coding Homo_sapiens 0 333
ENST00000514332 HNRNPH1-003 retained_intron Homo_sapiens 0 420
ENST00000515481 HNRNPH1-010 retained_intron Homo_sapiens 0 255
ENST00000515565 HNRNPH1P3-001 processed_pseudogene Homo_sapiens 0 337
ENST00000519056 HNRNPH1-045 protein_coding Homo_sapiens 0 366
ENST00000520415 HNRNPH1-036 retained_intron Homo_sapiens 0 350
ENST00000521173 HNRNPH1-049 protein_coding Homo_sapiens 0 265
ENST00000521790 HNRNPH1-040 protein_coding Homo_sapiens 0 363
ENST00000522958 HNRNPH1-037 retained_intron Homo_sapiens 0 368
ENST00000523137 HNRNPH1-046 protein_coding Homo_sapiens 0 298

Loading