C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATPase, Ca++ transporting, cardiac muscle, slow twitch 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000146241 atp2a2a-003 ENSDARG00000029439 7955 + 8:12205118-12258010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000146241
Transcript ID Brain
ENSDART00000146241 16.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QG CIL_0001QG_0001 CGP 8:12159602-12262526
CIL_0001QF CIL_0001QF_0001 CGP 8:12204786-12287624

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0006812 IEA cation transport
GO:0006816 IEA calcium ion transport
GO:0016021 IEA integral to membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021142 Atp2a3-201 protein_coding Mus_musculus 0 1162
ENSMUST00000031423 Atp2a2-201 protein_coding Mus_musculus 0 1773
ENSMUST00000032974 Atp2a1-001 protein_coding Mus_musculus 0 1773
ENSMUST00000108484 Atp2a3-002 protein_coding Mus_musculus 0 556
ENSMUST00000108485 Atp2a3-202 protein_coding Mus_musculus 0 1162
ENSMUST00000108486 Atp2a3-001 protein_coding Mus_musculus 0 556
ENSMUST00000163326 Atp2a3-203 protein_coding Mus_musculus 0 1162
ENSMUST00000177974 Atp2a2-202 protein_coding Mus_musculus 0 1773
ENSMUST00000179939 Atp2a2-203 protein_coding Mus_musculus 0 1773
ENST00000309890 ATP2A3-201 protein_coding Homo_sapiens 0 1314
ENST00000352011 ATP2A3-015 protein_coding Homo_sapiens 0 1314
ENST00000357084 ATP2A1-001 protein_coding Homo_sapiens 0 1906
ENST00000359983 ATP2A3-005 protein_coding Homo_sapiens 0 1314
ENST00000395503 ATP2A1-002 protein_coding Homo_sapiens 0 1906
ENST00000397035 ATP2A3-004 protein_coding Homo_sapiens 0 1314
ENST00000397041 ATP2A3-001 protein_coding Homo_sapiens 0 1314
ENST00000397043 ATP2A3-002 protein_coding Homo_sapiens 0 1314
ENST00000536376 ATP2A1-003 protein_coding Homo_sapiens 0 1845

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