C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, ubiquitous
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397041 ATP2A3-001 ENSG00000074370 9606 - 17:3923875-3964419 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000397041
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000397041 1.618±0.00 36.396±0.00 1.710±0.46 4.361±1.19 0.506±0.42 2.229±0.00 0.455±0.06 5.457±4.82 8.022±5.49 1.917±1.20 1.503±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006810 TAS transport
GO:0006816 TAS:IEA calcium ion transport
GO:0007596 TAS blood coagulation
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016529 IDA sarcoplasmic reticulum
GO:0031095 TAS platelet dense tubular network membrane
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108485 Atp2a3-202 protein_coding Mus_musculus 0 3685
ENSMUST00000021142 Atp2a3-201 protein_coding Mus_musculus 0 3648
ENSMUST00000163326 Atp2a3-203 protein_coding Mus_musculus 0 3648
ENSMUST00000108484 Atp2a3-002 protein_coding Mus_musculus 0 2146
ENSMUST00000108486 Atp2a3-001 protein_coding Mus_musculus 0 2146
ENSMUST00000032974 Atp2a1-001 protein_coding Mus_musculus 0 1411
ENSDART00000146241 atp2a2a-003 protein_coding Danio_rerio 0 1314
ENSDART00000042040 atp2a2a-001 protein_coding Danio_rerio 0 1314
ENSDART00000047201 atp2a2b-001 protein_coding Danio_rerio 0 1216
ENSMUST00000135234 Atp2a3-004 processed_transcript Mus_musculus 0 353

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