C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP, adenylate cyclase-associated protein, 2 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021802 Cap2-001 ENSMUSG00000021373 10090 + 13:46501848-46649642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021802 7.161±5.99 0.653±0.24 44.505±3.56 6.658±5.45 4.664±4.38 3.629±0.87 27.840±3.14 0.671±0.23 0.325±0.19 4.083±1.44 61.239±6.70 5.800±2.49 0.684±0.75 6.675±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0002 VISTA 13:46271320-46874349
CIL_0008JF CIL_0008JF_0002 VISTA 13:46271337-46874342
CIL_0008B7 CIL_0008B7_0002 VISTA 13:46332291-46935792
CIL_0003RO CIL_0003RO_0002 CGP 13:46418300-46649642
CIL_00081D CIL_00081D_0002 VISTA 13:46435395-47036634
CIL_0003RP CIL_0003RP_0002 CGP 13:46501848-46678056

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0003779 IEA actin binding
GO:0005886 IEA plasma membrane
GO:0007010 IEA cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229922 CAP2-001 protein_coding Homo_sapiens 0 1581
ENST00000378990 CAP2-006 protein_coding Homo_sapiens 0 1203
ENST00000465994 CAP2-007 protein_coding Homo_sapiens 0 826
ENST00000476263 CAP2-008 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000479291 CAP2-005 nonsense_mediated_decay Homo_sapiens 0 721
ENST00000489374 CAP2-003 protein_coding Homo_sapiens 0 826
ENST00000493172 CAP2-004 protein_coding Homo_sapiens 0 486
ENST00000557743 CAP2P1-001 transcribed_processed_pseudogene Homo_sapiens 0 780
ENST00000611958 CAP2-201 protein_coding Homo_sapiens 0 787
ENST00000616440 CAP2-202 protein_coding Homo_sapiens 0 791

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