C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: diphthamine biosynthesis 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022461 Dph3-002 ENSMUSG00000021905 10090 - 14:32080566-32085609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000022461
Transcript ID Muscle
ENSMUST00000022461 6.654±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HN CIL_0004HN_0002 CGP 14:32028989-32085692
CIL_0004HO CIL_0004HO_0002 CGP 14:32080566-32103202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0017183 ISS peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0046872 IEA metal ion binding
GO:0050709 ISS negative regulation of protein secretion
GO:0051099 ISS positive regulation of binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217162 TCFL5-201 protein_coding Homo_sapiens 0 278
ENST00000285082 DPH3-003 processed_transcript Homo_sapiens 0 207
ENST00000462982 DPH3-004 processed_transcript Homo_sapiens 0 211
ENST00000486648 DPH3P1-001 processed_pseudogene Homo_sapiens 0 268
ENST00000488423 DPH3-001 protein_coding Homo_sapiens 0 353

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