C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023207 Apod-003 ENSMUSG00000022548 10090 - 16:31297156-31314594 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023207
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023207 1.111±0.56 0.226±0.00 9.693±2.44 15.519±16.63 6.862±2.19 0.683±0.41 0.627±0.21 0.403±0.22 0.055±0.04 1.349±0.42 11.692±2.10 0.751±0.56 0.690±1.10 0.299±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CD CIL_0006CD_0002 CGP 16:31251537-31314808

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343267 APOD-001 protein_coding Homo_sapiens 0 420
ENST00000421243 APOD-005 protein_coding Homo_sapiens 0 420
ENST00000453131 APOD-004 protein_coding Homo_sapiens 0 357
ENST00000458447 APOD-003 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000463719 APOD-002 retained_intron Homo_sapiens 0 255

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