C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421243 APOD-005 ENSG00000189058 9606 - 3:195568908-195583940 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421243
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421243 4.220±0.00 60.163±0.00 47.218±0.00 2.032±0.00 32.317±19.35 3.618±0.00 0.566±0.00 15.832±0.00 145.985±130.56 23.199±4.59 124.351±31.73 31.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CD CIL_0006CD_0001 CGP 3:195514425-195584205

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005576 IEA extracellular region
GO:0006810 IEA transport
GO:0008289 IEA lipid binding
GO:0030682 IEA evasion or tolerance of host defense response
GO:0036094 IEA small molecule binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023207 Apod-003 retained_intron Mus_musculus 0 420
ENSMUST00000115230 Apod-002 protein_coding Mus_musculus 0 420
ENSMUST00000130560 Apod-001 protein_coding Mus_musculus 0 420
ENSMUST00000155682 Apod-005 retained_intron Mus_musculus 0 257

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