C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458447 APOD-003 ENSG00000189058 9606 - 3:195568753-195583954 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000458447
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000458447 1292.930±0.00 110.217±0.00 183.655±0.00 148.110±0.00 357.876±0.00 75.031±0.00 5.588±0.00 0.469±0.00 66.432±0.00 498.885±0.00 17.022±0.00 129.789±24.04 124.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CD CIL_0006CD_0001 CGP 3:195514425-195584205

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023207 Apod-003 retained_intron Mus_musculus 0 340
ENSMUST00000115230 Apod-002 protein_coding Mus_musculus 0 340
ENSMUST00000130560 Apod-001 protein_coding Mus_musculus 0 340
ENSMUST00000155682 Apod-005 retained_intron Mus_musculus 0 259

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