C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 39C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025294 Ttc39c-001 ENSMUSG00000024424 10090 + 18:12643344-12737049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025294
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025294 4.160±0.80 8.792±4.70 0.909±0.27 2.720±0.44 2.877±1.24 0.667±0.24 0.370±0.10 3.425±1.06 8.842±6.94 1.011±0.31 0.414±0.16 4.559±2.92 0.752±0.36 6.458±3.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WU CIL_0005WU_0002 CGP 18:12333819-12737050
CIL_0005WT CIL_0005WT_0002 CGP 18:12599926-12755146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304621 TTC39C-002 protein_coding Homo_sapiens 0 2113
ENST00000317571 TTC39C-001 protein_coding Homo_sapiens 0 2348
ENST00000540918 TTC39C-006 protein_coding Homo_sapiens 0 1075
ENST00000578150 TTC39C-003 processed_transcript Homo_sapiens 0 383
ENST00000579214 TTC39C-007 protein_coding Homo_sapiens 0 374
ENST00000584095 TTC39C-010 retained_intron Homo_sapiens 0 322
ENST00000584250 TTC39C-004 protein_coding Homo_sapiens 0 243
ENST00000584424 TTC39C-005 retained_intron Homo_sapiens 0 627

Loading