C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 39C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540918 TTC39C-006 ENSG00000168234 9606 + 18:24113353-24135610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverOvaryTestisENST00000540918
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000540918 0.749±0.00 0.108±0.00 2.103±0.00 0.841±0.00 0.443±0.00 0.079±0.03 9.160±8.88 15.380±0.00 0.353±0.00 1.570±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WU CIL_0005WU_0001 CGP 18:23689443-24135610
CIL_0005WT CIL_0005WT_0001 CGP 18:23992773-24161603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025294 Ttc39c-001 protein_coding Mus_musculus 0 1075
ENSMUST00000169401 Ttc39c-004 protein_coding Mus_musculus 0 1075
ENSMUST00000143388 Ttc39c-003 retained_intron Mus_musculus 0 265

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