C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 39C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317571 TTC39C-001 ENSG00000168234 9606 + 18:24014636-24133028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000317571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000317571 1.612±0.00 0.962±0.00 0.161±0.00 1.930±0.00 1.867±0.94 1.108±0.00 0.392±0.00 1.866±0.00 0.163±0.00 1.408±0.82 0.337±0.10 4.080±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WU CIL_0005WU_0001 CGP 18:23689443-24135610
CIL_0005WT CIL_0005WT_0001 CGP 18:23992773-24161603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025294 Ttc39c-001 protein_coding Mus_musculus 0 2348
ENSMUST00000169401 Ttc39c-004 protein_coding Mus_musculus 0 2113
ENSMUST00000141060 Ttc39c-002 retained_intron Mus_musculus 0 470
ENSMUST00000143388 Ttc39c-003 retained_intron Mus_musculus 0 265

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