C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: attractin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028781 Atrn-001 ENSMUSG00000027312 10090 + 2:130906495-131030333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028781
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028781 8.734±0.73 6.855±0.82 40.151±0.81 13.602±3.78 4.751±0.83 4.528±0.79 3.920±0.21 7.055±0.31 6.611±2.60 6.709±0.27 3.127±0.20 6.989±1.36 6.244±2.55 1.978±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032V CIL_00032V_0002 CGP 2:130706200-131030333
CIL_00067S CIL_00067S_0003 CGP 2:130906495-131043088

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IPI receptor activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006954 IEA inflammatory response
GO:0006979 IEA response to oxidative stress
GO:0016021 IEA integral component of membrane
GO:0021549 IMP cerebellum development
GO:0030246 IEA carbohydrate binding
GO:0040014 IMP regulation of multicellular organism growth
GO:0042552 IMP myelination
GO:0043473 IMP pigmentation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262919 ATRN-002 protein_coding Homo_sapiens 0 5620
ENST00000446916 ATRN-001 protein_coding Homo_sapiens 0 4835

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