C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamyl-tRNA(Gln) amidotransferase, subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029726 Pet112-002 ENSMUSG00000028085 10090 + 3:85574195-85654158 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029726
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029726 3.452±0.94 3.806±0.59 1.765±0.25 2.879±2.01 2.738±0.70 1.250±0.30 4.513±0.62 9.404±2.00 4.262±1.67 0.854±0.27 3.349±0.22 4.109±1.87 3.292±0.69 3.663±1.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064N CIL_00064N_0002 CGP 3:84444035-85887516
CIL_0004PH CIL_0004PH_0002 CGP 3:84496093-85887516

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263985 GATB-001 protein_coding Homo_sapiens 0 1284
ENST00000503160 GATB-005 nonsense_mediated_decay Homo_sapiens 0 1744
ENST00000505211 GATB-011 retained_intron Homo_sapiens 0 665
ENST00000508611 GATB-008 protein_coding Homo_sapiens 0 300
ENST00000511538 GATB-004 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000512306 GATB-003 protein_coding Homo_sapiens 0 604
ENST00000513504 GATB-012 processed_transcript Homo_sapiens 0 501
ENST00000515490 GATB-010 retained_intron Homo_sapiens 0 490
ENST00000515564 GATB-006 retained_intron Homo_sapiens 0 617
ENST00000515812 GATB-002 protein_coding Homo_sapiens 0 992
ENST00000515884 GATB-009 nonsense_mediated_decay Homo_sapiens 0 460

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