C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamyl-tRNA(Gln) amidotransferase, subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515812 GATB-002 ENSG00000059691 9606 - 4:151670849-151760999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000515812
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000515812 1.097±0.00 1.629±0.00 1.157±0.00 3.758±1.39 3.102±0.00 0.943±0.00 5.081±0.00 3.036±0.12 1.721±0.00 0.567±0.00 2.578±1.41 2.037±1.14 5.590±1.55 1.876±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OB CIL_0000OB_0002 CGP 4:151409216-151761023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0016874 IEA ligase activity
GO:0016884 IEA carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0030956 IEA glutamyl-tRNA(Gln) amidotransferase complex
GO:0032543 IEA mitochondrial translation
GO:0050567 IEA glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
GO:0070681 IEA glutaminyl-tRNAGln biosynthesis via transamidation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029726 Pet112-002 processed_transcript Mus_musculus 0 992
ENSMUST00000127348 Pet112-001 protein_coding Mus_musculus 0 992
ENSMUST00000107674 Pet112-004 protein_coding Mus_musculus 0 869
ENSMUST00000107672 Pet112-003 protein_coding Mus_musculus 0 776
ENSMUST00000134273 Pet112-005 processed_transcript Mus_musculus 0 353

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