C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 15 (oligopeptide transporter), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000266771 SLC15A4-001 ENSG00000139370 9606 - 12:128793191-128823983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266771
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266771 8.735±0.00 2.543±0.00 5.696±0.00 2.681±0.29 2.171±1.40 4.034±3.26 2.167±0.00 3.338±0.00 12.283±0.00 6.078±1.76 4.365±0.62 8.431±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038Z CIL_00038Z_0001 CGP 12:128267403-128823983
CIL_00006M CIL_00006M_0002 CGP 12:128793191-128984968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005290 IEA L-histidine transmembrane transporter activity
GO:0005765 TAS lysosomal membrane
GO:0006810 IEA transport
GO:0006811 TAS ion transport
GO:0006857 IEA oligopeptide transport
GO:0015031 IEA protein transport
GO:0015293 IEA symporter activity
GO:0015817 IEA histidine transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031367 Slc15a4-001 protein_coding Mus_musculus 0 1592
ENSMUST00000153832 Slc15a4-002 nonsense_mediated_decay Mus_musculus 0 780
ENSMUST00000124569 Slc15a4-003 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000144603 Slc15a4-006 nonsense_mediated_decay Mus_musculus 0 505
ENSMUST00000182841 Slc15a4-007 retained_intron Mus_musculus 0 451
ENSMUST00000152727 Slc15a4-005 protein_coding Mus_musculus 0 303
ENSDART00000061691 slc15a4-201 protein_coding Danio_rerio 0 263
ENSDART00000076101 slc15a4-001 protein_coding Danio_rerio 0 257
ENSDART00000128499 slc15a4-202 protein_coding Danio_rerio 4.00001e-41 174

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