C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 15 (oligopeptide transporter), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376744 SLC15A4-002 ENSG00000139370 9606 - 12:128793195-128823779 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverLungMuscleOvaryTestisENST00000376744
Transcript ID Adrenal Brain Breast Kidney Liver Lung Muscle Ovary Testis
ENST00000376744 2.486±0.00 2.516±0.12 4.006±0.00 0.867±0.00 2.221±0.56 3.969±2.03 6.405±2.30 3.475±0.00 4.233±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038Z CIL_00038Z_0001 CGP 12:128267403-128823983
CIL_00006M CIL_00006M_0002 CGP 12:128793191-128984968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124569 Slc15a4-003 nonsense_mediated_decay Mus_musculus 0 1245
ENSMUST00000153832 Slc15a4-002 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000031367 Slc15a4-001 protein_coding Mus_musculus 0 651
ENSMUST00000144603 Slc15a4-006 nonsense_mediated_decay Mus_musculus 0 375
ENSMUST00000182841 Slc15a4-007 retained_intron Mus_musculus 0 329
ENSDART00000061691 slc15a4-201 protein_coding Danio_rerio 0 241
ENSDART00000076101 slc15a4-001 protein_coding Danio_rerio 0 235
ENSDART00000128499 slc15a4-202 protein_coding Danio_rerio 3.00004e-41 174

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