C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00038Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181234-ENSG00000139370 CGP 9606 12:128267403-128823983
GeneTranscriptPositionBiotype
ENSG00000139370 (SLC15A4)
solute carrier family 15 (oligopeptide transporter), member 4 		ENST00000266771 (SLC15A4-001) 128793191-128823983 protein_coding
ENST00000366292 (SLC15A4-004) 128800807-128815928 retained_intron
ENST00000376740 (SLC15A4-007) 128808806-128823522 nonsense_mediated_decay
ENST00000376744 (SLC15A4-002) 128793195-128823779 nonsense_mediated_decay
ENST00000535272 (SLC15A4-003) 128814960-128819867 processed_transcript
ENST00000539703 (SLC15A4-006) 128809081-128823593 processed_transcript
ENST00000544112 (SLC15A4-005) 128794173-128810358 retained_intron
ENST00000545031 (SLC15A4-008) 128793895-128801701 retained_intron
ENST00000614634 (SLC15A4-201) 128793201-128814959 protein_coding
ENSG00000181234 (TMEM132C)
transmembrane protein 132C 		ENST00000435159 (TMEM132C-001) 128267403-128707915 protein_coding
ENSG00000257025 (RP11-553N19.1)
 ENST00000536216 (RP11-553N19.1-001) 128399978-128404814 sense_intronic
ENSG00000279180 (RP11-417O18.1)
 ENST00000624053 (RP11-417O18.1-001) 128288159-128289056 TEC
ENSG00000279500 (RP11-21K12.2)
 ENST00000623017 (RP11-21K12.2-001) 128813186-128814750 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_00038Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034324-ENSMUSG00000029416 CGP 10090 5:127241808-127632897
GeneTranscriptPositionBiotype
ENSMUSG00000029416 (Slc15a4)
solute carrier family 15, member 4 		ENSMUST00000031367 (Slc15a4-001) 127595664-127617416 protein_coding
ENSMUST00000124569 (Slc15a4-003) 127595667-127617226 nonsense_mediated_decay
ENSMUST00000144603 (Slc15a4-006) 127601930-127632880 nonsense_mediated_decay
ENSMUST00000152727 (Slc15a4-005) 127603807-127609351 protein_coding
ENSMUST00000153832 (Slc15a4-002) 127595667-127617418 nonsense_mediated_decay
ENSMUST00000155321 (Slc15a4-004) 127608793-127632897 protein_coding
ENSMUST00000182841 (Slc15a4-007) 127614446-127617381 retained_intron
ENSMUSG00000034324 (Tmem132c)
transmembrane protein 132C 		ENSMUST00000119026 (Tmem132c-001) 127241808-127565793 protein_coding
ENSMUST00000128068 (Tmem132c-003) 127538260-127564866 processed_transcript
ENSMUST00000132592 (Tmem132c-002) 127541626-127564866 processed_transcript
ENSMUST00000134780 (Tmem132c-004) 127241826-127287336 processed_transcript
ENSMUST00000145748 (Tmem132c-005) 127553254-127564486 protein_coding
ENSMUSG00000049971 (Glt1d1)
glycosyltransferase 1 domain containing 1 		ENSMUST00000118139 (Glt1d1-001) 127632262-127708754 protein_coding
ENSMUST00000134529 (Glt1d1-003) 127657033-127689871 retained_intron
ENSMUST00000137157 (Glt1d1-002) 127632262-127691902 retained_intron
ENSMUSG00000087104 (Tmem132cos)
transmembrane protein 132C, opposite strand 		ENSMUST00000145064 (Tmem132cos-001) 127256858-127281634 antisense
ENSMUST00000154361 (Tmem132cos-002) 127256936-127281597 antisense
ENSMUST00000155106 (Tmem132cos-003) 127256874-127281594 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038Z_0001ENSG00000139370ENST00000266771ENST00000366292ENST00000376740ENST00000376744ENST00000535272ENST00000539703ENST00000544112ENST00000545031ENST00000614634ENSG00000181234ENST00000435159ENSG00000257025ENST00000536216ENSG00000279180ENST00000624053ENSG00000279500ENST00000623017CIL_00038Z_0002ENSMUSG00000029416ENSMUST00000031367ENSMUST00000124569ENSMUST00000144603ENSMUST00000152727ENSMUST00000153832ENSMUST00000155321ENSMUST00000182841ENSMUSG00000034324ENSMUST00000119026ENSMUST00000128068ENSMUST00000132592ENSMUST00000134780ENSMUST00000145748ENSMUSG00000049971ENSMUST00000118139ENSMUST00000134529ENSMUST00000137157ENSMUSG00000087104ENSMUST00000145064ENSMUST00000154361ENSMUST00000155106
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038Z_0001ENSG00000139370ENST00000266771ENST00000366292ENST00000376744ENST00000539703ENST00000544112ENST00000545031ENST00000614634ENSG00000181234ENST00000435159ENSG00000257025ENST00000536216ENSG00000279180ENST00000624053ENSG00000279500ENST00000623017CIL_00038Z_0002ENSMUSG00000029416ENSMUST00000031367ENSMUST00000124569ENSMUST00000153832ENSMUSG00000034324ENSMUST00000119026ENSMUST00000128068ENSMUST00000132592ENSMUST00000134780ENSMUST00000145748ENSMUSG00000049971ENSMUST00000118139ENSMUST00000134529ENSMUST00000137157ENSMUSG00000087104ENSMUST00000145064ENSMUST00000154361ENSMUST00000155106
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139370 ENST00000266771 8.735±0.00 N/A N/A 2.543±0.00 5.696±0.00 2.681±0.29 2.171±1.40 4.034±3.26 2.167±0.00 3.338±0.00 12.283±0.00 6.078±1.76 4.365±0.62 8.431±0.69
ENST00000366292 N/A N/A 0.530±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376744 N/A 2.486±0.00 N/A 2.516±0.12 4.006±0.00 N/A N/A 0.867±0.00 2.221±0.56 3.969±2.03 6.405±2.30 3.475±0.00 N/A 4.233±0.00
ENST00000535272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.589±0.00 N/A N/A N/A
ENST00000544112 N/A N/A 0.914±0.00 N/A 1.219±0.00 N/A 0.500±0.00 N/A 1.597±0.00 N/A N/A N/A N/A N/A
ENST00000545031 N/A N/A N/A 1.316±0.00 1.497±0.00 N/A 0.858±0.00 0.840±0.00 N/A 1.346±0.00 N/A N/A N/A N/A
ENST00000614634 2.386±0.00 4.425±0.00 N/A 4.096±0.00 2.035±0.00 5.505±0.00 1.891±0.00 2.022±1.20 1.118±0.00 N/A N/A 2.825±0.50 1.975±0.64 6.651±2.90
ENSG00000181234 ENST00000435159 14.917±0.00 1.728±0.00 0.019±0.00 1.700±1.10 4.884±4.70 1.113±0.72 0.597±0.47 0.237±0.23 0.506±0.00 0.817±0.00 0.137±0.00 1.666±1.42 4.247±1.64 1.681±1.21
ENSG00000257025 ENST00000536216 N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279180 ENST00000624053 0.432±0.00 0.749±0.00 N/A 0.396±0.00 0.464±0.00 0.356±0.00 0.080±0.00 0.233±0.00 0.202±0.09 0.497±0.08 0.181±0.00 0.119±0.00 0.084±0.00 0.126±0.03
ENSG00000279500 ENST00000623017 0.044±0.00 0.365±0.00 0.991±0.00 0.433±0.10 0.395±0.28 0.151±0.00 0.393±0.24 0.562±0.26 0.053±0.00 0.053±0.00 1.963±1.42 0.513±0.57 0.048±0.02 0.273±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029416 ENSMUST00000031367 2.948±1.10 9.680±3.57 5.592±0.64 3.197±1.93 12.529±4.54 7.225±1.54 1.791±0.73 3.390±2.30 4.102±1.19 11.574±2.90 2.550±0.68 14.269±6.24 3.975±1.91 4.458±0.00
ENSMUST00000124569 N/A N/A N/A 2.785±0.00 N/A N/A 0.681±0.00 N/A N/A N/A N/A 0.859±0.00 0.957±0.07 N/A
ENSMUST00000144603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153832 3.945±0.51 5.076±2.42 1.696±0.00 3.023±1.91 7.428±3.21 5.699±1.12 2.123±0.80 2.598±1.07 3.329±1.65 5.779±1.05 1.271±0.38 3.873±2.16 0.939±0.07 4.037±0.45
ENSMUST00000155321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034324 ENSMUST00000119026 8.939±8.81 0.386±0.08 0.313±0.05 3.853±1.59 1.743±0.87 0.387±0.10 0.043±0.03 0.042±0.02 0.048±0.04 5.309±0.59 0.026±0.02 1.584±0.63 0.395±0.13 0.063±0.03
ENSMUST00000128068 0.066±0.00 N/A N/A N/A 0.340±0.00 N/A 0.037±0.01 0.023±0.01 0.025±0.01 N/A 0.022±0.00 0.362±0.09 0.120±0.02 0.042±0.00
ENSMUST00000132592 0.066±0.00 N/A N/A N/A 0.340±0.00 N/A 0.037±0.01 0.023±0.01 0.024±0.01 N/A 0.022±0.00 0.362±0.09 0.120±0.02 0.042±0.00
ENSMUST00000134780 N/A 0.909±0.39 N/A N/A N/A 0.729±0.20 0.113±0.01 0.057±0.00 0.127±0.00 N/A 0.084±0.03 3.107±0.47 N/A 0.278±0.00
ENSMUST00000145748 N/A N/A N/A N/A N/A N/A 0.089±0.00 0.256±0.00 N/A N/A 0.131±0.00 N/A N/A N/A
ENSMUSG00000049971 ENSMUST00000118139 0.075±0.03 0.064±0.03 0.043±0.00 2.658±2.59 0.255±0.12 1.811±0.09 0.012±0.00 0.568±0.25 0.944±0.99 0.231±0.11 0.016±0.00 0.066±0.02 0.574±0.30 20.734±0.80
ENSMUST00000134529 0.368±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.00 3.024±0.00 N/A
ENSMUST00000137157 0.051±0.02 N/A N/A N/A 0.099±0.02 N/A 0.019±0.00 N/A 0.053±0.00 0.153±0.00 N/A 0.053±0.05 0.082±0.00 N/A
ENSMUSG00000087104 ENSMUST00000145064 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 7.516±1.71
ENSMUST00000154361 N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.071±1.31
ENSMUST00000155106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.471±4.34

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