C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404360 ZNF12-002 ENSG00000164631 9606 - 7:6688433-6700914 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyOvaryPlacentaTestisENST00000404360
Transcript ID Adrenal Brain Breast Heart Kidney Ovary Placenta Testis
ENST00000404360 1.183±0.00 0.594±0.22 1.060±0.00 0.158±0.00 0.409±0.00 1.852±0.00 0.670±0.27 0.413±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049861 Rbak-201 protein_coding Mus_musculus 0 614
ENSMUST00000164068 Rbak-002 protein_coding Mus_musculus 0 614
ENSMUST00000166382 Rbak-003 protein_coding Mus_musculus 0 614
ENSMUST00000165318 Rbak-001 protein_coding Mus_musculus 0 614
ENSMUST00000032591 Zfp12-001 protein_coding Mus_musculus 0 274
ENSMUST00000060762 Zfp397-201 protein_coding Mus_musculus 3.9937e-43 182
ENSMUST00000160195 Zfp12-004 processed_transcript Mus_musculus 8e-30 137
ENSMUST00000075916 Zfp12-003 nonsense_mediated_decay Mus_musculus 8e-30 137
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 5e-27 128
ENSMUST00000077485 Zfp12-002 protein_coding Mus_musculus 2e-20 106
ENSMUST00000040667 Zfp300-001 protein_coding Mus_musculus 8e-20 104
ENSMUST00000063262 Zfp68-003 protein_coding Mus_musculus 6e-16 92
ENSMUST00000085852 Zfp68-002 protein_coding Mus_musculus 6e-16 92
ENSMUST00000110905 Zfp68-001 protein_coding Mus_musculus 6e-16 92
ENSMUST00000189105 RP23-9C7.3-001 unprocessed_pseudogene Mus_musculus 0.00000000000003 86
ENSMUST00000039271 2610008E11Rik-001 protein_coding Mus_musculus 0.0000000000004 82
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 0.0000001 64

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