C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035090 Fbxl2-001 ENSMUSG00000032507 10090 - 9:113976707-114026761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaENSMUST00000035090
Transcript ID Brain Muscle Ovary Placenta
ENSMUST00000035090 12.731±0.55 1.119±0.19 4.636±0.32 4.042±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DD CIL_0003DD_0002 CGP 9:113812586-113977199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IMP ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0006511 IMP ubiquitin-dependent protein catabolic process
GO:0006513 IGI protein monoubiquitination
GO:0016020 ISS membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283627 FBXL2-003 processed_transcript Homo_sapiens 0 1557
ENST00000283629 UBP1-001 protein_coding Homo_sapiens 0 259
ENST00000421391 FBXL2-008 nonsense_mediated_decay Homo_sapiens 0 1443
ENST00000422741 FBXL2-009 nonsense_mediated_decay Homo_sapiens 0 1393
ENST00000425973 FBXL2-017 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000432809 FBXL2-004 nonsense_mediated_decay Homo_sapiens 0 1203
ENST00000435207 FBXL2-002 nonsense_mediated_decay Homo_sapiens 0 1458
ENST00000447368 UBP1-002 protein_coding Homo_sapiens 0 257
ENST00000451636 FBXL2-005 nonsense_mediated_decay Homo_sapiens 0 1046
ENST00000460186 FBXL2-019 retained_intron Homo_sapiens 0 558
ENST00000461094 FBXL2-022 retained_intron Homo_sapiens 0 285
ENST00000463698 FBXL2-018 retained_intron Homo_sapiens 0 300
ENST00000463736 FBXL2-007 processed_transcript Homo_sapiens 0 1203
ENST00000464164 FBXL2-015 processed_transcript Homo_sapiens 0 494
ENST00000484457 FBXL2-001 protein_coding Homo_sapiens 0 1777
ENST00000492136 UBP1-004 retained_intron Homo_sapiens 0 257
ENST00000492662 FBXL2-020 retained_intron Homo_sapiens 0 573
ENST00000493778 FBXL2-014 processed_transcript Homo_sapiens 0 446
ENST00000497411 FBXL2-016 retained_intron Homo_sapiens 0 510
ENST00000507198 FBXL2-006 protein_coding Homo_sapiens 0 508
ENST00000538892 FBXL2-201 protein_coding Homo_sapiens 0 560

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