C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily c, polypeptide 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035488 Cyp2c38-001 ENSMUSG00000032808 10090 - 19:39389556-39463075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000035488
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000035488 0.012±0.00 0.074±0.00 0.068±0.02 0.019±0.01 0.031±0.03 25.562±24.76 0.037±0.00 0.029±0.00 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_000B CGP 19:39269405-39463075
CIL_0007H6 CIL_0007H6_000H CGP 19:39389556-39568529

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process
GO:0070330 IEA aromatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260682 CYP2C9-001 protein_coding Homo_sapiens 0 996
ENST00000285979 CYP2C18-001 protein_coding Homo_sapiens 0 1081
ENST00000339022 CYP2C18-002 protein_coding Homo_sapiens 0 549
ENST00000371321 CYP2C19-001 protein_coding Homo_sapiens 0 985
ENST00000464755 RP11-400G3.5-001 nonsense_mediated_decay Homo_sapiens 0 885

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