C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily C, polypeptide 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260682 CYP2C9-001 ENSG00000138109 9606 + 10:94938671-94989390 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260682
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260682 0.507±0.00 0.069±0.00 0.499±0.46 1.308±0.00 0.024±0.00 200.081±199.70 312.456±0.00 0.110±0.00 0.087±0.00 0.271±0.22 0.020±0.01 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_0004 CGP 10:94762624-94989390
CIL_0007H6 CIL_0007H6_0003 CGP 10:94938658-95069497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IDA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006805 TAS xenobiotic metabolic process
GO:0008144 IDA drug binding
GO:0008202 IMP steroid metabolic process
GO:0008395 IMP steroid hydroxylase activity
GO:0016098 IDA monoterpenoid metabolic process
GO:0016491 IDA oxidoreductase activity
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0017144 IDA drug metabolic process
GO:0018675 IEA (S)-limonene 6-monooxygenase activity
GO:0018676 IEA (S)-limonene 7-monooxygenase activity
GO:0019369 TAS arachidonic acid metabolic process
GO:0019373 TAS epoxygenase P450 pathway
GO:0019627 IDA urea metabolic process
GO:0020037 IEA heme binding
GO:0032787 IDA monocarboxylic acid metabolic process
GO:0034875 IDA caffeine oxidase activity
GO:0042737 IMP drug catabolic process
GO:0042738 IDA exogenous drug catabolic process
GO:0043231 TAS intracellular membrane-bounded organelle
GO:0043603 IDA cellular amide metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0052741 IEA (R)-limonene 6-monooxygenase activity
GO:0055114 IDA:IEA oxidation-reduction process
GO:0070989 IDA oxidative demethylation
GO:0097267 TAS omega-hydroxylase P450 pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003137 Cyp2c29-001 protein_coding Mus_musculus 0 1162
ENSMUST00000087234 Cyp2c66-001 protein_coding Mus_musculus 0 1157
ENSMUST00000080171 Cyp2c50-001 protein_coding Mus_musculus 0 1083
ENSMUST00000176624 Cyp2c29-003 protein_coding Mus_musculus 0 1033
ENSMUST00000025968 Cyp2c39-001 protein_coding Mus_musculus 0 1029
ENSMUST00000048959 Cyp2c54-201 protein_coding Mus_musculus 0 1003
ENSMUST00000035488 Cyp2c38-001 protein_coding Mus_musculus 0 996
ENSMUST00000146494 Cyp2c66-002 nonsense_mediated_decay Mus_musculus 0 941
ENSMUST00000177087 Cyp2c29-002 nonsense_mediated_decay Mus_musculus 0 907
ENSMUST00000099472 Cyp2c68-001 protein_coding Mus_musculus 0 730
ENSMUST00000067328 Cyp2c67-001 protein_coding Mus_musculus 0 728
ENSMUST00000160476 Cyp2c40-001 protein_coding Mus_musculus 0 708
ENSMUST00000168838 Cyp2c69-201 protein_coding Mus_musculus 0 702
ENSMUST00000068094 Cyp2c50-002 protein_coding Mus_musculus 0 520
ENSMUST00000124391 Cyp2c50-003 retained_intron Mus_musculus 0 510
ENSMUST00000162630 Cyp2c40-002 nonsense_mediated_decay Mus_musculus 0 438
ENSMUST00000162434 Cyp2c40-003 processed_transcript Mus_musculus 0 200

Loading