C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily C, polypeptide 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371321 CYP2C19-001 ENSG00000165841 9606 + 10:94762624-94853260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyENST00000371321
Transcript ID Bladder Brain Breast Heart Kidney
ENST00000371321 0.112±0.00 0.062±0.03 0.255±0.00 0.031±0.02 61.855±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_0002 CGP 10:94683621-94853073
CIL_0007H6 CIL_0007H6_000A CGP 10:94688154-94853260
CIL_0007H6 CIL_0007H6_0004 CGP 10:94762624-94989390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IDA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006805 TAS xenobiotic metabolic process
GO:0008202 IMP steroid metabolic process
GO:0008395 IMP steroid hydroxylase activity
GO:0016098 IDA monoterpenoid metabolic process
GO:0016491 IDA oxidoreductase activity
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0017144 IDA drug metabolic process
GO:0018675 IEA (S)-limonene 6-monooxygenase activity
GO:0018676 IEA (S)-limonene 7-monooxygenase activity
GO:0019369 TAS arachidonic acid metabolic process
GO:0019373 TAS epoxygenase P450 pathway
GO:0019825 TAS oxygen binding
GO:0019899 IPI enzyme binding
GO:0020037 IDA:IEA heme binding
GO:0042738 IDA exogenous drug catabolic process
GO:0043231 TAS intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process
GO:0046483 IDA heterocycle metabolic process
GO:0052741 IEA (R)-limonene 6-monooxygenase activity
GO:0055114 IDA:IEA oxidation-reduction process
GO:0097267 TAS omega-hydroxylase P450 pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087234 Cyp2c66-001 protein_coding Mus_musculus 0 1138
ENSMUST00000087236 Cyp2c65-001 protein_coding Mus_musculus 0 1109
ENSMUST00000003137 Cyp2c29-001 protein_coding Mus_musculus 0 1092
ENSMUST00000080171 Cyp2c50-001 protein_coding Mus_musculus 0 1027
ENSMUST00000025968 Cyp2c39-001 protein_coding Mus_musculus 0 1013
ENSMUST00000035488 Cyp2c38-001 protein_coding Mus_musculus 0 985
ENSMUST00000176624 Cyp2c29-003 protein_coding Mus_musculus 0 974
ENSMUST00000048959 Cyp2c54-201 protein_coding Mus_musculus 0 972
ENSMUST00000146494 Cyp2c66-002 nonsense_mediated_decay Mus_musculus 0 942
ENSMUST00000177087 Cyp2c29-002 nonsense_mediated_decay Mus_musculus 0 863
ENSMUST00000067328 Cyp2c67-001 protein_coding Mus_musculus 0 723
ENSMUST00000099472 Cyp2c68-001 protein_coding Mus_musculus 0 708
ENSMUST00000160476 Cyp2c40-001 protein_coding Mus_musculus 0 702
ENSMUST00000168838 Cyp2c69-201 protein_coding Mus_musculus 0 697
ENSMUST00000068094 Cyp2c50-002 protein_coding Mus_musculus 0 488
ENSMUST00000124391 Cyp2c50-003 retained_intron Mus_musculus 0 477
ENSMUST00000162630 Cyp2c40-002 nonsense_mediated_decay Mus_musculus 0 449
ENSMUST00000162434 Cyp2c40-003 processed_transcript Mus_musculus 1.99965e-42 178

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