C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sphingosine-1-phosphate phosphotase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036172 Sgpp2-001 ENSMUSG00000032908 10090 + 1:78310345-78420289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLungOvaryPlacentaTestisENSMUST00000036172
Transcript ID Adipose Adrenal Brain Colon Kidney Lung Ovary Placenta Testis
ENSMUST00000036172 2.508±0.12 0.934±0.30 3.153±0.00 44.296±10.11 7.980±1.02 17.494±0.22 4.512±1.41 6.310±2.83 4.682±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C0 CIL_0008C0_0002 VISTA 1:77814828-78415847
CIL_0008LF CIL_0008LF_0002 VISTA 1:77884098-78485294
CIL_000464 CIL_000464_0002 CGP 1:78101267-78420289
CIL_00041I CIL_00041I_0003 CGP 1:78310345-78488897

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006670 IEA sphingosine metabolic process
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0042392 IEA sphingosine-1-phosphate phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321276 SGPP2-001 protein_coding Homo_sapiens 0 1105

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