C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036570 Appl1-001 ENSMUSG00000040760 10090 - 14:26918988-26971232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036570
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036570 4.790±1.86 4.495±1.89 3.772±0.69 7.935±0.17 3.582±1.51 2.978±1.08 2.466±0.45 2.978±0.18 1.520±0.43 3.719±1.63 2.565±0.65 5.204±2.05 7.304±2.33 2.693±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CD CIL_0000CD_0002 CGP 14:26894557-26971232
CIL_0000CC CIL_0000CC_0002 CGP 14:26918988-27002329

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005829 IEA cytosol
GO:0007049 IEA cell cycle
GO:0008283 ISS cell proliferation
GO:0010008 ISS endosome membrane
GO:0012506 IEA vesicle membrane
GO:0016581 ISS NuRD complex
GO:0042802 IEA identical protein binding
GO:0043422 IEA protein kinase B binding
GO:0046324 IEA regulation of glucose import
GO:0070062 IEA extracellular vesicular exosome
GO:0090003 IEA regulation of establishment of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261531 SNW1-001 protein_coding Homo_sapiens 0 542
ENST00000288266 APPL1-001 protein_coding Homo_sapiens 0 3103
ENST00000444459 APPL1-002 protein_coding Homo_sapiens 0 555
ENST00000444644 RP4-641G12.4-001 processed_pseudogene Homo_sapiens 0 438
ENST00000464446 APPL1-003 retained_intron Homo_sapiens 0 893
ENST00000468342 APPL1-007 retained_intron Homo_sapiens 0 449
ENST00000482800 APPL1-005 retained_intron Homo_sapiens 0 2806
ENST00000488530 APPL1-004 retained_intron Homo_sapiens 0 682
ENST00000492501 APPL1-006 retained_intron Homo_sapiens 0 316
ENST00000495803 APPL1-008 protein_coding Homo_sapiens 0 368
ENST00000554775 SNW1-004 protein_coding Homo_sapiens 0 542
ENST00000555761 SNW1-003 protein_coding Homo_sapiens 0 542
ENST00000556428 SNW1-002 nonsense_mediated_decay Homo_sapiens 0 542

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