C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP-GLY domain containing linker protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036999 Clip2-201 ENSMUSG00000063146 10090 - 5:134489386-134552434 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036999
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036999 7.726±1.94 4.771±1.11 3.863±0.84 19.086±3.50 5.775±2.97 18.040±4.95 2.404±0.60 8.946±1.85 0.938±0.29 9.354±1.66 0.778±0.18 8.911±4.08 44.613±27.09 0.537±0.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005881 IDA cytoplasmic microtubule
GO:0035371 IDA microtubule plus-end
GO:0051010 IDA microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223398 CLIP2-201 protein_coding Homo_sapiens 0 1711
ENST00000302528 CLIP1-001 protein_coding Homo_sapiens 0 268
ENST00000358808 CLIP1-201 protein_coding Homo_sapiens 0 268
ENST00000361545 CLIP2-001 protein_coding Homo_sapiens 0 3277
ENST00000361654 CLIP1-007 protein_coding Homo_sapiens 0 267
ENST00000395060 CLIP2-002 protein_coding Homo_sapiens 0 1659
ENST00000482424 CLIP2-005 retained_intron Homo_sapiens 0 198
ENST00000487091 CLIP2-003 retained_intron Homo_sapiens 0 802
ENST00000491075 CLIP2-004 retained_intron Homo_sapiens 0 289
ENST00000493166 CLIP2-006 protein_coding Homo_sapiens 0 350
ENST00000537178 CLIP1-002 protein_coding Homo_sapiens 0 267
ENST00000540338 CLIP1-003 protein_coding Homo_sapiens 0 265
ENST00000541108 CLIP1-004 nonsense_mediated_decay Homo_sapiens 1e-28 132
ENST00000541410 CLIP1-012 retained_intron Homo_sapiens 2e-28 132
ENST00000545889 CLIP1-008 protein_coding Homo_sapiens 2.94273e-44 185
ENST00000620786 CLIP1-202 protein_coding Homo_sapiens 0 265

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