C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily H (eag-related), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430723 KCNH2-201 ENSG00000055118 9606 - 7:150949899-150978100 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryPlacentaENST00000430723
Transcript ID Bladder Liver Muscle Ovary Placenta
ENST00000430723 0.066±0.00 0.085±0.00 0.011±0.00 0.679±0.00 0.539±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004OG CIL_0004OG_0001 CGP 7:150944961-151014588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0004871 IEA signal transducer activity
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036092 Kcnh2-001 protein_coding Mus_musculus 0 2263
ENSMUST00000115098 Kcnh2-002 protein_coding Mus_musculus 0 1736
ENSMUST00000145539 Kcnh6-004 nonsense_mediated_decay Mus_musculus 0 1229
ENSMUST00000001965 Kcnh6-001 protein_coding Mus_musculus 0 1229
ENSDART00000090809 kcnh6-201 protein_coding Danio_rerio 0 865
ENSDART00000134201 kcnh6-001 protein_coding Danio_rerio 0 865
ENSMUST00000142197 Kcnh2-004 processed_transcript Mus_musculus 0 784
ENSMUST00000106903 Kcnh6-002 protein_coding Mus_musculus 0 617
ENSDART00000084238 KCNH7 (4 of 6)-201 protein_coding Danio_rerio 0 568
ENSMUST00000126791 Kcnh2-003 processed_transcript Mus_musculus 0 435
ENSMUST00000140695 Kcnh6-003 processed_transcript Mus_musculus 6e-24 117
ENSMUST00000041415 Kcnh3-201 protein_coding Mus_musculus 0.00001 57

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