Transcript ID | Adrenal | Liver | Ovary | Placenta | Testis |
---|---|---|---|---|---|
ENSMUST00000043866 | 3.965±1.12 | 0.233±0.06 | 3.197±0.90 | 1.268±0.58 | 0.042±0.00 |
Transcript Info |
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Description: | ATP-binding cassette, sub-family A (ABC1), member 7 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000043866 | Abca7-201 | ENSMUSG00000035722 | 10090 | + | 10:79997615-80015568 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0008XG | CIL_0008XG_0002 | VISTA | 10:79539861-80142369 |
CIL_0000I2 | CIL_0000I2_0002 | CGP | 10:79988584-80015572 |
CIL_0000HU | CIL_0000HU_0002 | CGP | 10:79996494-80031472 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001891 | IDA | phagocytic cup |
GO:0005515 | IPI | protein binding |
GO:0005524 | IEA | ATP binding |
GO:0005548 | IDA | phospholipid transporter activity |
GO:0005622 | IDA | intracellular |
GO:0005768 | IEA | endosome |
GO:0005794 | IEA | Golgi apparatus |
GO:0005886 | ISS | plasma membrane |
GO:0006200 | IEA | ATP catabolic process |
GO:0006909 | IEA | phagocytosis |
GO:0007613 | IMP | memory |
GO:0009986 | IDA | cell surface |
GO:0010875 | IDA | positive regulation of cholesterol efflux |
GO:0016021 | IEA | integral component of membrane |
GO:0016324 | IDA | apical plasma membrane |
GO:0016887 | IEA | ATPase activity |
GO:0017121 | ISS | phospholipid scrambling |
GO:0018149 | IDA | peptide cross-linking |
GO:0032587 | IDA | ruffle membrane |
GO:0032780 | ISS | negative regulation of ATPase activity |
GO:0032781 | ISS | positive regulation of ATPase activity |
GO:0033344 | ISS | cholesterol efflux |
GO:0033700 | IDA | phospholipid efflux |
GO:0034188 | IDA | apolipoprotein A-I receptor activity |
GO:0034380 | ISS | high-density lipoprotein particle assembly |
GO:0034504 | IDA | protein localization to nucleus |
GO:0038027 | IDA | apolipoprotein A-I-mediated signaling pathway |
GO:0042985 | IDA | negative regulation of amyloid precursor protein biosynthetic process |
GO:0050766 | IMP | positive regulation of phagocytosis |
GO:0070374 | IMP | positive regulation of ERK1 and ERK2 cascade |
GO:1900223 | IMP | positive regulation of beta-amyloid clearance |
GO:1901076 | IMP | positive regulation of engulfment of apoptotic cell |
GO:1902430 | IDA | negative regulation of beta-amyloid formation |
GO:1902995 | IDA | positive regulation of phospholipid efflux |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000136772 | abca4a-002 | protein_coding | Danio_rerio | 0.000000004 | 69 |
ENST00000263094 | ABCA7-201 | protein_coding | Homo_sapiens | 0 | 1984 |
ENST00000265662 | ABCA2-201 | protein_coding | Homo_sapiens | 7e-38 | 165 |
ENST00000341511 | ABCA2-002 | protein_coding | Homo_sapiens | 7e-38 | 165 |
ENST00000371605 | ABCA2-202 | protein_coding | Homo_sapiens | 7e-38 | 165 |
ENST00000433129 | ABCA7-001 | protein_coding | Homo_sapiens | 0 | 1984 |
ENST00000435683 | ABCA7-002 | protein_coding | Homo_sapiens | 0 | 1984 |
ENST00000437791 | ABCA2-006 | processed_transcript | Homo_sapiens | 3e-37 | 159 |
ENST00000459850 | ABCA2-013 | retained_intron | Homo_sapiens | 7e-38 | 165 |
ENST00000463603 | ABCA2-008 | retained_intron | Homo_sapiens | 5e-39 | 165 |
ENST00000479446 | ABCA2-009 | nonsense_mediated_decay | Homo_sapiens | 5e-38 | 165 |
ENST00000487109 | ABCA2-016 | nonsense_mediated_decay | Homo_sapiens | 6e-38 | 165 |
ENST00000532194 | ABCA7-014 | retained_intron | Homo_sapiens | 0 | 656 |
ENST00000614293 | ABCA2-203 | protein_coding | Homo_sapiens | 7e-38 | 165 |