C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064687-ENSG00000180448 CGP 9606 19:1040101-1086628
GeneTranscriptPositionBiotype
ENSG00000064687 (ABCA7)
ATP-binding cassette, sub-family A (ABC1), member 7 		ENST00000263094 (ABCA7-201) 1040103-1065569 protein_coding
ENST00000433129 (ABCA7-001) 1041246-1065572 protein_coding
ENST00000435683 (ABCA7-002) 1042625-1065572 protein_coding
ENST00000524383 (ABCA7-017) 1064659-1065328 processed_transcript
ENST00000524850 (ABCA7-006) 1040120-1042391 protein_coding
ENST00000525073 (ABCA7-013) 1056934-1065569 protein_coding
ENST00000525238 (ABCA7-004) 1040118-1042465 retained_intron
ENST00000525939 (ABCA7-015) 1062261-1063945 retained_intron
ENST00000526885 (ABCA7-003) 1040103-1042744 retained_intron
ENST00000527496 (ABCA7-008) 1041205-1042104 retained_intron
ENST00000529442 (ABCA7-009) 1056928-1058740 nonsense_mediated_decay
ENST00000530092 (ABCA7-011) 1054076-1055939 nonsense_mediated_decay
ENST00000530703 (ABCA7-005) 1040116-1041682 retained_intron
ENST00000531467 (ABCA7-007) 1041202-1042176 protein_coding
ENST00000531478 (ABCA7-016) 1064052-1065572 retained_intron
ENST00000532194 (ABCA7-014) 1057040-1059263 retained_intron
ENST00000533574 (ABCA7-010) 1045532-1047554 processed_transcript
ENST00000611490 (ABCA7-018) 1040101-1041553 protein_coding
ENST00000612569 (ABCA7-012) 1062179-1065458 protein_coding
ENSG00000099817 (POLR2E)
polymerase (RNA) II (DNA directed) polypeptide E, 25kDa 		ENST00000215587 (POLR2E-012) 1088163-1095374 nonsense_mediated_decay
ENST00000585838 (POLR2E-014) 1088645-1095261 protein_coding
ENST00000586215 (POLR2E-008) 1088424-1089930 retained_intron
ENST00000586746 (POLR2E-010) 1086579-1095354 protein_coding
ENST00000586817 (POLR2E-003) 1088167-1095375 retained_intron
ENST00000589737 (POLR2E-006) 1088148-1095375 nonsense_mediated_decay
ENST00000590060 (POLR2E-007) 1086595-1092346 nonsense_mediated_decay
ENST00000591709 (POLR2E-005) 1091501-1095361 retained_intron
ENST00000591767 (POLR2E-002) 1088148-1095336 nonsense_mediated_decay
ENST00000592597 (POLR2E-004) 1093730-1095349 retained_intron
ENST00000612655 (POLR2E-013) 1087645-1095380 protein_coding
ENST00000614705 (POLR2E-011) 1089897-1095354 processed_transcript
ENST00000615234 (POLR2E-001) 1086579-1095357 protein_coding
ENST00000619917 (POLR2E-009) 1088388-1095366 protein_coding
ENSG00000180448 (HMHA1)
histocompatibility (minor) HA-1 		ENST00000313093 (HMHA1-002) 1067166-1086628 protein_coding
ENST00000539243 (HMHA1-001) 1065923-1086628 protein_coding
ENST00000543365 (HMHA1-004) 1071221-1086628 protein_coding
ENST00000586033 (HMHA1-014) 1073583-1074724 retained_intron
ENST00000586378 (HMHA1-017) 1082784-1085996 retained_intron
ENST00000586866 (HMHA1-007) 1067498-1086628 protein_coding
ENST00000586937 (HMHA1-015) 1081415-1082956 retained_intron
ENST00000587186 (HMHA1-010) 1066509-1073223 protein_coding
ENST00000587602 (HMHA1-006) 1067317-1086628 nonsense_mediated_decay
ENST00000590214 (HMHA1-003) 1067327-1086626 protein_coding
ENST00000590512 (HMHA1-016) 1082521-1083329 processed_transcript
ENST00000590577 (HMHA1-005) 1077487-1086628 protein_coding
ENST00000591169 (HMHA1-012) 1082939-1086628 nonsense_mediated_decay
ENST00000591293 (HMHA1-011) 1067319-1080961 retained_intron
ENST00000592297 (HMHA1-009) 1082841-1086600 retained_intron
ENST00000592335 (HMHA1-013) 1071513-1073549 processed_transcript
CIL_0000HU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035722-ENSMUSG00000035697 CGP 10090 10:79996494-80031472
GeneTranscriptPositionBiotype
ENSMUSG00000035697 (Hmha1)
histocompatibility (minor) HA-1 		ENSMUST00000043311 (Hmha1-004) 80019653-80031468 protein_coding
ENSMUST00000099501 (Hmha1-001) 80016653-80031472 protein_coding
ENSMUST00000105373 (Hmha1-002) 80016916-80031469 protein_coding
ENSMUST00000140974 (Hmha1-003) 80016739-80031469 retained_intron
ENSMUST00000150022 (Hmha1-005) 80021743-80031462 retained_intron
ENSMUSG00000035722 (Abca7)
ATP-binding cassette, sub-family A (ABC1), member 7 		ENSMUST00000043866 (Abca7-201) 79997615-80015568 protein_coding
ENSMUST00000132517 (Abca7-001) 79996494-80015572 protein_coding
ENSMUST00000171637 (Abca7-202) 79997576-80015553 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HU_0001ENSG00000064687ENST00000263094ENST00000433129ENST00000435683ENST00000524383ENST00000524850ENST00000525073ENST00000525238ENST00000525939ENST00000526885ENST00000527496ENST00000529442ENST00000530092ENST00000530703ENST00000531467ENST00000531478ENST00000532194ENST00000533574ENST00000611490ENST00000612569ENSG00000099817ENST00000215587ENST00000585838ENST00000586215ENST00000586746ENST00000586817ENST00000589737ENST00000590060ENST00000591709ENST00000591767ENST00000592597ENST00000612655ENST00000614705ENST00000615234ENST00000619917ENSG00000180448ENST00000313093ENST00000539243ENST00000543365ENST00000586033ENST00000586378ENST00000586866ENST00000586937ENST00000587186ENST00000587602ENST00000590214ENST00000590512ENST00000590577ENST00000591169ENST00000591293ENST00000592297ENST00000592335CIL_0000HU_0002ENSMUSG00000035697ENSMUST00000043311ENSMUST00000099501ENSMUST00000105373ENSMUST00000140974ENSMUST00000150022ENSMUSG00000035722ENSMUST00000043866ENSMUST00000132517ENSMUST00000171637
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HU_0001ENSG00000064687ENST00000263094ENST00000433129ENST00000435683ENST00000524850ENST00000525073ENST00000526885ENST00000529442ENST00000531478ENST00000532194ENSG00000099817ENST00000215587ENST00000585838ENST00000589737ENST00000591767ENST00000612655ENST00000614705ENST00000615234ENST00000619917ENSG00000180448ENST00000313093ENST00000543365ENST00000590577ENST00000591169CIL_0000HU_0002ENSMUSG00000035697ENSMUST00000043311ENSMUST00000099501ENSMUST00000105373ENSMUST00000140974ENSMUST00000150022ENSMUSG00000035722ENSMUST00000043866ENSMUST00000132517ENSMUST00000171637
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064687 ENST00000263094 0.918±0.00 1.406±0.00 N/A N/A 0.957±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433129 N/A N/A 0.093±0.00 1.098±0.00 1.567±0.00 N/A 0.435±0.41 0.960±0.00 N/A 0.851±0.49 N/A 2.224±0.00 1.394±0.03 N/A
ENST00000435683 0.660±0.00 N/A N/A 0.110±0.00 0.272±0.00 N/A N/A 0.764±0.00 0.312±0.00 1.524±0.00 N/A N/A 1.687±0.00 0.619±0.22
ENST00000524383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.990±0.00 N/A N/A
ENST00000525073 3.145±0.00 3.028±0.00 N/A N/A 2.232±0.00 0.598±0.25 N/A 3.795±0.00 0.620±0.00 5.049±0.00 0.787±0.00 2.032±2.09 3.116±1.24 2.307±0.00
ENST00000525238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526885 N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A N/A
ENST00000527496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529442 N/A N/A 1.272±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531478 N/A N/A N/A 4.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.606±0.00 N/A
ENST00000532194 N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000533574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000099817 ENST00000215587 48.025±0.00 N/A 1.298±0.00 12.318±6.61 63.832±0.00 35.050±0.00 14.471±13.44 43.041±0.00 23.709±20.35 61.080±0.00 21.516±18.99 32.859±18.13 67.599±15.21 41.823±6.38
ENST00000585838 N/A N/A 2.931±0.00 N/A N/A N/A 26.215±0.00 43.582±0.00 36.608±0.00 N/A 52.571±0.00 5.772±0.00 N/A N/A
ENST00000586215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589737 N/A N/A N/A 2.852±0.00 N/A N/A N/A N/A N/A N/A N/A 44.939±7.18 70.570±4.09 N/A
ENST00000590060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591767 N/A N/A N/A N/A N/A N/A 2.342±0.00 N/A N/A N/A N/A 23.306±0.00 42.282±0.00 21.872±0.00
ENST00000592597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612655 N/A N/A N/A 3.361±0.00 N/A 2.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614705 N/A N/A N/A N/A N/A N/A N/A 17.977±0.00 N/A N/A N/A 27.315±23.56 N/A N/A
ENST00000615234 11.151±0.00 23.508±0.00 0.717±0.00 4.976±4.31 17.773±0.00 3.728±2.87 3.701±0.00 7.476±0.00 3.482±1.53 N/A N/A 7.984±0.00 N/A 6.785±1.10
ENST00000619917 58.223±0.00 N/A N/A 32.031±0.00 77.633±0.00 50.663±0.00 N/A 25.111±0.00 N/A N/A N/A N/A N/A 42.859±0.00
ENSG00000180448 ENST00000313093 N/A 28.504±0.00 0.451±0.00 N/A 1.754±0.00 N/A N/A N/A 0.982±0.00 8.462±6.00 N/A N/A 11.658±0.18 N/A
ENST00000539243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543365 N/A N/A N/A N/A N/A N/A 0.424±0.00 N/A N/A N/A N/A N/A 8.173±0.00 N/A
ENST00000586033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590577 N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.377±0.00 N/A N/A N/A N/A
ENST00000591169 N/A 75.799±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035697 ENSMUST00000043311 6.890±4.27 1.513±0.31 4.552±0.48 0.464±0.04 11.436±2.63 3.167±0.37 0.940±0.56 1.520±0.07 2.520±1.42 13.026±1.13 0.476±0.39 5.642±2.33 1.598±0.36 0.857±0.16
ENSMUST00000099501 3.688±0.43 3.609±0.73 2.254±0.69 0.465±0.01 54.882±22.83 5.255±2.42 1.764±0.73 2.747±1.66 7.130±5.48 18.775±2.65 0.813±0.85 2.278±0.73 0.722±0.23 0.240±0.05
ENSMUST00000105373 1.596±0.22 1.266±0.00 N/A N/A N/A N/A N/A 2.058±0.00 1.261±0.66 N/A 0.720±0.56 N/A 0.486±0.00 N/A
ENSMUST00000140974 4.402±0.98 1.254±0.00 1.462±0.30 0.166±0.00 47.235±1.96 3.585±1.16 0.507±0.18 1.871±0.65 3.428±1.76 7.979±0.38 0.233±0.04 2.026±0.69 0.665±0.14 N/A
ENSMUST00000150022 2.757±0.00 2.061±0.66 N/A 0.339±0.00 31.367±1.34 3.166±0.54 2.078±1.08 2.090±0.31 1.810±1.05 8.761±0.54 0.161±0.03 2.305±0.00 0.504±0.00 0.172±0.00
ENSMUSG00000035722 ENSMUST00000043866 N/A 3.965±1.12 N/A N/A N/A N/A N/A N/A 0.233±0.06 N/A N/A 3.197±0.90 1.268±0.58 0.042±0.00
ENSMUST00000132517 3.361±0.59 2.911±0.62 1.498±0.46 1.763±0.00 5.423±2.17 8.563±2.90 1.667±0.48 2.266±0.72 2.445±2.42 4.820±1.85 1.605±0.19 2.757±1.11 1.483±0.54 0.611±0.04
ENSMUST00000171637 2.725±0.57 4.397±1.79 N/A 1.314±0.59 3.598±0.44 4.747±1.67 0.777±0.12 1.060±0.15 1.530±1.20 5.218±0.56 0.866±0.25 3.042±1.02 2.065±1.10 0.273±0.00

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