C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000I2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064666-ENSG00000064687 CGP 9606 19:1026581-1065572
GeneTranscriptPositionBiotype
ENSG00000064666 (CNN2)
calponin 2 		ENST00000263097 (CNN2-001) 1026581-1039068 protein_coding
ENST00000348419 (CNN2-003) 1026610-1039068 protein_coding
ENST00000562015 (CNN2-007) 1026586-1032695 protein_coding
ENST00000562075 (CNN2-006) 1026691-1036677 protein_coding
ENST00000562958 (CNN2-005) 1026629-1039068 protein_coding
ENST00000564572 (CNN2-011) 1036799-1039064 retained_intron
ENST00000565096 (CNN2-004) 1026618-1039068 protein_coding
ENST00000566695 (CNN2-008) 1030943-1037733 protein_coding
ENST00000568865 (CNN2-009) 1031137-1038309 protein_coding
ENST00000569352 (CNN2-013) 1026629-1037632 nonsense_mediated_decay
ENST00000606983 (CNN2-014) 1026662-1036472 protein_coding
ENST00000607102 (CNN2-010) 1026691-1036688 protein_coding
ENSG00000064687 (ABCA7)
ATP-binding cassette, sub-family A (ABC1), member 7 		ENST00000263094 (ABCA7-201) 1040103-1065569 protein_coding
ENST00000433129 (ABCA7-001) 1041246-1065572 protein_coding
ENST00000435683 (ABCA7-002) 1042625-1065572 protein_coding
ENST00000524383 (ABCA7-017) 1064659-1065328 processed_transcript
ENST00000524850 (ABCA7-006) 1040120-1042391 protein_coding
ENST00000525073 (ABCA7-013) 1056934-1065569 protein_coding
ENST00000525238 (ABCA7-004) 1040118-1042465 retained_intron
ENST00000525939 (ABCA7-015) 1062261-1063945 retained_intron
ENST00000526885 (ABCA7-003) 1040103-1042744 retained_intron
ENST00000527496 (ABCA7-008) 1041205-1042104 retained_intron
ENST00000529442 (ABCA7-009) 1056928-1058740 nonsense_mediated_decay
ENST00000530092 (ABCA7-011) 1054076-1055939 nonsense_mediated_decay
ENST00000530703 (ABCA7-005) 1040116-1041682 retained_intron
ENST00000531467 (ABCA7-007) 1041202-1042176 protein_coding
ENST00000531478 (ABCA7-016) 1064052-1065572 retained_intron
ENST00000532194 (ABCA7-014) 1057040-1059263 retained_intron
ENST00000533574 (ABCA7-010) 1045532-1047554 processed_transcript
ENST00000611490 (ABCA7-018) 1040101-1041553 protein_coding
ENST00000612569 (ABCA7-012) 1062179-1065458 protein_coding
ENSG00000279753 (AC011558.5)
 ENST00000623459 (AC011558.5-001) 1038727-1039064 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0000I2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004665-ENSMUSG00000035722 CGP 10090 10:79988584-80015572
GeneTranscriptPositionBiotype
ENSMUSG00000004665 (Cnn2)
calponin 2 		ENSMUST00000004784 (Cnn2-001) 79988584-79996062 protein_coding
ENSMUST00000105374 (Cnn2-002) 79988623-79994684 protein_coding
ENSMUSG00000035722 (Abca7)
ATP-binding cassette, sub-family A (ABC1), member 7 		ENSMUST00000043866 (Abca7-201) 79997615-80015568 protein_coding
ENSMUST00000132517 (Abca7-001) 79996494-80015572 protein_coding
ENSMUST00000171637 (Abca7-202) 79997576-80015553 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000I2_0001ENSG00000064666ENST00000263097ENST00000348419ENST00000562958ENST00000565096ENST00000566695ENST00000568865ENSG00000064687ENST00000263094ENST00000433129ENST00000435683ENST00000524850ENST00000525073ENST00000526885ENST00000529442ENST00000531478ENST00000532194ENSG00000279753ENST00000623459CIL_0000I2_0002ENSMUSG00000004665ENSMUST00000004784ENSMUST00000105374ENSMUSG00000035722ENSMUST00000043866ENSMUST00000132517ENSMUST00000171637
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064666 ENST00000263097 24.677±0.00 16.439±0.00 N/A 4.992±0.00 23.945±20.48 1.258±0.00 8.183±5.50 9.970±9.14 9.411±0.00 82.052±78.24 5.780±0.00 73.516±48.78 19.272±7.00 4.222±0.28
ENST00000348419 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.490±0.00 N/A 32.748±0.00 N/A N/A
ENST00000562015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562958 N/A N/A N/A N/A N/A 2.970±0.00 N/A N/A 3.012±0.00 N/A N/A N/A N/A N/A
ENST00000564572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565096 N/A N/A N/A 0.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566695 N/A N/A N/A N/A N/A 17.819±0.00 N/A N/A N/A N/A N/A 37.374±0.00 29.674±0.00 7.123±4.40
ENST00000568865 N/A N/A 32.851±0.00 2.622±0.00 10.358±0.00 6.379±0.00 3.464±1.02 4.497±0.00 13.614±0.00 21.551±0.00 1.112±0.00 24.135±0.00 N/A 1.305±0.00
ENST00000569352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000064687 ENST00000263094 0.918±0.00 1.406±0.00 N/A N/A 0.957±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433129 N/A N/A 0.093±0.00 1.098±0.00 1.567±0.00 N/A 0.435±0.41 0.960±0.00 N/A 0.851±0.49 N/A 2.224±0.00 1.394±0.03 N/A
ENST00000435683 0.660±0.00 N/A N/A 0.110±0.00 0.272±0.00 N/A N/A 0.764±0.00 0.312±0.00 1.524±0.00 N/A N/A 1.687±0.00 0.619±0.22
ENST00000524383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.990±0.00 N/A N/A
ENST00000525073 3.145±0.00 3.028±0.00 N/A N/A 2.232±0.00 0.598±0.25 N/A 3.795±0.00 0.620±0.00 5.049±0.00 0.787±0.00 2.032±2.09 3.116±1.24 2.307±0.00
ENST00000525238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526885 N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A N/A
ENST00000527496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529442 N/A N/A 1.272±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531478 N/A N/A N/A 4.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.606±0.00 N/A
ENST00000532194 N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000533574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279753 ENST00000623459 N/A N/A N/A 6.776±0.00 183.152±0.00 9.022±0.00 19.855±0.00 4.709±0.00 19.553±0.00 246.804±0.00 N/A 357.574±61.42 N/A 43.961±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004665 ENSMUST00000004784 50.029±31.97 16.653±4.89 71.865±6.79 5.942±3.65 75.457±29.49 33.248±7.85 19.041±2.89 19.686±1.70 9.195±6.63 180.593±21.55 1.919±0.36 82.102±33.98 72.014±16.54 2.287±1.16
ENSMUST00000105374 9.087±0.00 13.395±2.66 N/A 2.485±0.26 43.257±13.73 14.203±3.06 N/A 7.248±0.00 N/A N/A 1.103±0.15 52.145±9.48 99.113±27.99 N/A
ENSMUSG00000035722 ENSMUST00000043866 N/A 3.965±1.12 N/A N/A N/A N/A N/A N/A 0.233±0.06 N/A N/A 3.197±0.90 1.268±0.58 0.042±0.00
ENSMUST00000132517 3.361±0.59 2.911±0.62 1.498±0.46 1.763±0.00 5.423±2.17 8.563±2.90 1.667±0.48 2.266±0.72 2.445±2.42 4.820±1.85 1.605±0.19 2.757±1.11 1.483±0.54 0.611±0.04
ENSMUST00000171637 2.725±0.57 4.397±1.79 N/A 1.314±0.59 3.598±0.44 4.747±1.67 0.777±0.12 1.060±0.15 1.530±1.20 5.218±0.56 0.866±0.25 3.042±1.02 2.065±1.10 0.273±0.00

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