C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2-associated transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043881 Bclaf1-002 ENSMUSG00000037608 10090 + 10:20312484-20342499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043881 4.222±2.29 2.812±0.00 18.645±1.43 17.326±8.93 3.265±0.45 2.272±1.18 2.712±1.02 2.400±1.34 6.770±4.39 6.144±1.70 4.045±1.30 12.034±8.34 7.078±2.57 3.100±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0002 VISTA 10:20184902-20788767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0043065 IEA positive regulation of apoptotic process
GO:0043620 IEA regulation of DNA-templated transcription in response to stress
GO:0044822 IEA poly(A) RNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:2000144 IEA positive regulation of DNA-templated transcription, initiation
GO:2001022 IEA positive regulation of response to DNA damage stimulus
GO:2001244 IEA positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353331 BCLAF1-201 protein_coding Homo_sapiens 0 3398
ENST00000392348 BCLAF1-011 protein_coding Homo_sapiens 0 3221
ENST00000505813 CTD-2089O24.1-001 processed_pseudogene Homo_sapiens 0 3395
ENST00000526228 BCLAF1-015 retained_intron Homo_sapiens 0 758
ENST00000527536 BCLAF1-005 protein_coding Homo_sapiens 0 3437
ENST00000527613 BCLAF1-008 nonsense_mediated_decay Homo_sapiens 0 3227
ENST00000527759 BCLAF1-006 protein_coding Homo_sapiens 0 4427
ENST00000528229 BCLAF1-016 retained_intron Homo_sapiens 0 311
ENST00000529522 BCLAF1-014 retained_intron Homo_sapiens 0 708
ENST00000529826 BCLAF1-001 protein_coding Homo_sapiens 0 3175
ENST00000529917 BCLAF1-012 processed_transcript Homo_sapiens 0 893
ENST00000530429 BCLAF1-009 nonsense_mediated_decay Homo_sapiens 0 3179
ENST00000530767 BCLAF1-010 protein_coding Homo_sapiens 0 2159
ENST00000531224 BCLAF1-003 protein_coding Homo_sapiens 0 4486
ENST00000532384 BCLAF1-002 nonsense_mediated_decay Homo_sapiens 0 3247
ENST00000533422 BCLAF1-021 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000533621 BCLAF1-017 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000534269 BCLAF1-007 nonsense_mediated_decay Homo_sapiens 0 1574
ENST00000534762 BCLAF1-020 protein_coding Homo_sapiens 0 970
ENST00000624956 ABBA01017803.1-201 pseudogene Homo_sapiens 0 3114

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