C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, alpha isozyme
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376745 PPP1CA-001 ENSG00000172531 9606 - 11:67398201-67401931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376745
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376745 35.514±0.00 102.921±0.00 11.630±0.00 8.098±0.00 33.349±10.76 28.768±8.31 21.654±16.13 27.647±21.56 23.252±13.44 27.005±12.98 37.743±20.64 43.262±24.17 93.694±29.26 27.087±15.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005977 IEA glycogen metabolic process
GO:0006470 ISS protein dephosphorylation
GO:0007049 IEA cell cycle
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0016787 IEA hydrolase activity
GO:0016791 ISS phosphatase activity
GO:0019433 TAS triglyceride catabolic process
GO:0030512 TAS negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032922 ISS circadian regulation of gene expression
GO:0042752 IMP regulation of circadian rhythm
GO:0043153 ISS entrainment of circadian clock by photoperiod
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0051301 IEA cell division
GO:0070062 IDA extracellular vesicular exosome
GO:0070688 IDA MLL5-L complex
GO:0072357 IDA PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180575 PPP1CA-201 protein_coding Mus_musculus 0 1544
ENSMUST00000046094 Ppp1ca-201 protein_coding Mus_musculus 0 1544
ENSDART00000127716 ppp1cc-201 protein_coding Danio_rerio 0 776
ENSMUST00000086294 Ppp1cc-002 protein_coding Mus_musculus 0 641
ENSMUST00000102528 Ppp1cc-001 protein_coding Mus_musculus 0 641
ENSMUST00000118909 AC164158.1-001 processed_pseudogene Mus_musculus 0 640
ENSDART00000130498 ppp1cbl-201 protein_coding Danio_rerio 0 556
ENSMUST00000122076 Gm14122-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000132555 Ppp1cc-005 retained_intron Mus_musculus 0 490
ENSMUST00000128309 Ppp1cc-009 retained_intron Mus_musculus 0 490
ENSMUST00000135090 Ppp1cc-004 retained_intron Mus_musculus 0 283
ENSMUST00000181329 RAD9A-201 protein_coding Mus_musculus 1.99965e-42 178
ENSMUST00000025740 Rad9a-201 protein_coding Mus_musculus 1.99965e-42 178
ENSMUST00000134719 Ppp1cc-008 processed_transcript Mus_musculus 5e-37 159
ENSMUST00000151184 Ppp1cc-006 processed_transcript Mus_musculus 5e-37 159

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